RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 PRB1P04280 392 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 SDSP20132 328 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 RDXP35241 583 aaKnown RBP12□□□□□ -0.49
VAMP1-204ENST00000535180 SREBF1P36956 1147 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 MLH1P40692 756 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 PDE1AP54750 535 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 SIM1P81133 766 aaPredicted RBP12□□□□□ -0.49
VAMP1-204ENST00000535180 PRKCEQ02156 737 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 TRDNQ13061 729 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 RAB33AQ14088 237 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 UAP1L1Q3KQV9 507 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 PRSS36Q5K4E3 855 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 TEX2Q8IWB9 1127 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 MFSD6LQ8IWD5 586 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 SRBD1Q8N5C6 995 aaKnown RBP12□□□□□ -0.49
VAMP1-204ENST00000535180 SMARCD2Q92925 531 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 ZFP42Q96MM3 310 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 ZNF577Q9BSK1 485 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 IFT122Q9HBG6 1241 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 SUCLA2Q9P2R7 463 aaPredicted RBP12□□□□□ -0.49
VAMP1-204ENST00000535180 TCEAL9Q9UHQ7 104 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 SAMM50Q9Y512 469 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 IPPQ9Y573 584 aa12□□□□□ -0.49
VAMP1-204ENST00000535180 SF3B1O75533 1304 aaKnown RBP eCLIP12□□□□□ -0.49
VAMP1-204ENST00000535180 SPAARA0A1B0GVQ0 90 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 WDR27A2RRH5 827 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 SLC38A8A6NNN8 435 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 TK2O00142 265 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 PLEKHA8P1O95397 391 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 SOX9P48436 509 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 GNAQP50148 359 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 KPNA1P52294 538 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-204ENST00000535180 SART3Q15020 963 aaKnown RBP11.99□□□□□ -0.49
VAMP1-204ENST00000535180 TXNDC11Q6PKC3 985 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 RALGPS2Q86X27 583 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-204ENST00000535180 KSR1Q8IVT5 923 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 CHCHD4Q8N4Q1 142 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 CEP89Q96ST8 783 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 CCDC86Q9H6F5 360 aaKnown RBP11.99□□□□□ -0.49
VAMP1-204ENST00000535180 RIC8AQ9NPQ8 531 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 DACH1Q9UI36 760 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 TNRC6BQ9UPQ9 1833 aaKnown RBP11.99□□□□□ -0.49
VAMP1-204ENST00000535180 GON4LQ3T8J9 2241 aa11.99□□□□□ -0.49
VAMP1-204ENST00000535180 MYBPHLA2RUH7 354 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 SPECC1L-ADORA2AF8WAN1 911 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 CTHP32929 405 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 OR1D2P34982 312 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 VIPR2P41587 438 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 HSP90AA2PQ14568 343 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-204ENST00000535180 FAM171A1Q5VUB5 890 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 PDXDC1Q6P996 788 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 CWC27Q6UX04 472 aaKnown RBP11.98□□□□□ -0.49
VAMP1-204ENST00000535180 RAB44Q7Z6P3 723 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-204ENST00000535180 ZNF605Q86T29 641 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 CEP57Q86XR8 500 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 CMTR1Q8N1G2 835 aaKnown RBP11.98□□□□□ -0.49
VAMP1-204ENST00000535180 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 GSTCDQ8NEC7 633 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 RABGGTAQ92696 567 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 TCEAL4Q96EI5 215 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 NLRP4Q96MN2 994 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 ZSWIM3Q96MP5 696 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 UBL7Q96S82 380 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-204ENST00000535180 NIFKQ9BYG3 293 aaKnown RBP11.98□□□□□ -0.49
VAMP1-204ENST00000535180 TRPV4Q9HBA0 871 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 SLC8A2Q9UPR5 921 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 RAI2Q9Y5P3 530 aa11.98□□□□□ -0.49
VAMP1-204ENST00000535180 NUP210Q8TEM1 1887 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-204ENST00000535180 MYO16Q9Y6X6 1858 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 hCG_1642624A0A1W2PR95 340 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 WDR64B1ANS9 1081 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 ZNF197O14709 1029 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 CHADO15335 359 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 DDAH1O94760 285 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 IRX4P78413 519 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 SPIRE1Q08AE8 756 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 PON2Q15165 354 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 UGCGQ16739 394 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 MTERF2Q49AM1 385 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 PKN3Q6P5Z2 889 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 HEATR3Q7Z4Q2 680 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 SRGAP1Q7Z6B7 1085 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 PIP4P1Q86T03 277 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 ZNF654Q8IZM8 581 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 FAM200AQ8TCP9 573 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 SLC39A7Q92504 469 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 RILPL2Q969X0 211 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 CORO1BQ9BR76 489 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 MINDY3Q9H8M7 445 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 DISC1Q9NRI5 854 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 GIT1Q9Y2X7 761 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 HES2Q9Y543 173 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 TRIP11Q15643 1979 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 CEP192Q8TEP8 1941 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 USP9XQ93008 2570 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-204ENST00000535180 KIAA1549LQ6ZVL6 1849 aa11.97□□□□□ -0.49
VAMP1-204ENST00000535180 PTPRDP23468 1912 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 NCANO14594 1321 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 ARHGEF37A1IGU5 675 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms