RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 COLEC11Q9BWP8 271 aa13.49□□□□□ -0.25
KNL1-212ENST00000534204 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
KNL1-212ENST00000534204 NEUROG3Q9Y4Z2 214 aa13.49□□□□□ -0.25
KNL1-212ENST00000534204 LNP1A1A4G5 178 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 HYAL3O43820 417 aaPredicted RBP13.48□□□□□ -0.25
KNL1-212ENST00000534204 MOSPD3O75425 235 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 ITGA4P13612 1032 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 IGFBP6P24592 240 aaPredicted RBP13.48□□□□□ -0.25
KNL1-212ENST00000534204 GDI1P31150 447 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 SOX9P48436 509 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 SETQ01105 290 aaPredicted RBP13.48□□□□□ -0.25
KNL1-212ENST00000534204 RAB33AQ14088 237 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 PSMD5Q16401 504 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 C19orf48Q6RUI8 117 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 B3GNT9Q6UX72 402 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 RALYLQ86SE5 291 aaKnown RBP13.48□□□□□ -0.25
KNL1-212ENST00000534204 IRF7Q92985 503 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 GJA10Q969M2 543 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 RSPRY1Q96DX4 576 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 TRMT61BQ9BVS5 477 aaKnown RBP13.48□□□□□ -0.25
KNL1-212ENST00000534204 UNC45AQ9H3U1 944 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 VPS45Q9NRW7 570 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 SEPT9Q9UHD8 586 aaPredicted RBP13.48□□□□□ -0.25
KNL1-212ENST00000534204 TRIP11Q15643 1979 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 PTPRDP23468 1912 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 TENM4Q6N022 2769 aa13.48□□□□□ -0.25
KNL1-212ENST00000534204 CACNA1EQ15878 2313 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 WDR27A2RRH5 827 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 CDX4O14627 284 aaPredicted RBP13.47□□□□□ -0.25
KNL1-212ENST00000534204 EXTL3O43909 919 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 RPP40O75818 363 aaKnown RBP13.47□□□□□ -0.25
KNL1-212ENST00000534204 KIF4AO95239 1232 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 CEACAM1P13688 526 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 CSRP1P21291 193 aaKnown RBP13.47□□□□□ -0.25
KNL1-212ENST00000534204 CIITAP33076 1130 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 PXNP49023 591 aaPredicted RBP13.47□□□□□ -0.25
KNL1-212ENST00000534204 MLLT6P55198 1093 aaPredicted RBP13.47□□□□□ -0.25
KNL1-212ENST00000534204 CCINQ13939 588 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 UVSSAQ2YD98 709 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 JAKMIP3Q5VZ66 844 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 KIAA1211LQ6NV74 962 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 ANO5Q75V66 913 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 HASPINQ8TF76 798 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 TTPALQ9BTX7 342 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 NXF3Q9H4D5 531 aaKnown RBP13.47□□□□□ -0.25
KNL1-212ENST00000534204 UBN1Q9NPG3 1134 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 MSRB2Q9Y3D2 182 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 SAMM50Q9Y512 469 aa13.47□□□□□ -0.25
KNL1-212ENST00000534204 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■■■■■ 87.4
KNL1-212ENST00000534204 SMCO2A6NFE2 343 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 MSH4O15457 936 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 TSPAN1O60635 241 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 PSMC3P17980 439 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
KNL1-212ENST00000534204 NAB2Q15742 525 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 PLK5Q496M5 336 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 PRR16Q569H4 304 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 FAM171A1Q5VUB5 890 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 SRGAP1Q7Z6B7 1085 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
KNL1-212ENST00000534204 CNNM3Q8NE01 707 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 DUSP15Q9H1R2 295 aaPredicted RBP13.46□□□□□ -0.25
KNL1-212ENST00000534204 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 ZFP14Q9HCL3 533 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 COL4A3BPQ9Y5P4 624 aa13.46□□□□□ -0.25
KNL1-212ENST00000534204 ABCA7Q8IZY2 2146 aa13.46□□□□□ -0.26
KNL1-212ENST00000534204 CCDC163A0A0D9SF12 145 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 ARHGEF37A1IGU5 675 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 FAM221BA6H8Z2 402 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 HIP1O00291 1037 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 VIPR2P41587 438 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 GRIK3Q13003 919 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 AMHR2Q16671 573 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 COL28A1Q2UY09 1125 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 XKR3Q5GH77 459 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 FANCBQ8NB91 859 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 SLC5A5Q92911 643 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 MTA3Q9BTC8 594 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 TRPV4Q9HBA0 871 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 MTRRQ9UBK8 725 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 GIT1Q9Y2X7 761 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 THADAQ6YHU6 1953 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 ZMYM2Q9UBW7 1377 aa13.45□□□□□ -0.26
KNL1-212ENST00000534204 MYBPHLA2RUH7 354 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 CHMP2AO43633 222 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 PRC1O43663 620 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 CTHP32929 405 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 OR1D2P34982 312 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 LIFRP42702 1097 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 DNM2P50570 870 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 HDAC1Q13547 482 aaPredicted RBP13.44□□□□□ -0.26
KNL1-212ENST00000534204 LRRC32Q14392 662 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 PLA2G4FQ68DD2 849 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 RTL10Q7L3V2 364 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 KIF12Q96FN5 646 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 CPB2Q96IY4 423 aa13.44□□□□□ -0.26
KNL1-212ENST00000534204 BCLAF3A2AJT9 711 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms