RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 TRPV4Q9HBA0 871 aa10.09□□□□□ -0.79
PACS1-213ENST00000533756 ZSWIM5Q9P217 1185 aa10.09□□□□□ -0.79
PACS1-213ENST00000533756 NOTCH4Q99466 2003 aa10.09□□□□□ -0.79
PACS1-213ENST00000533756 SLC38A8A6NNN8 435 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 ZNF197O14709 1029 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 DCLK1O15075 740 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 CHADO15335 359 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 WISP1O95388 367 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 CTHP32929 405 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 KIF5BP33176 963 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 TXNDC11Q6PKC3 985 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 PRSS55Q6UWB4 352 aaPredicted RBP10.08□□□□□ -0.8
PACS1-213ENST00000533756 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 HDDC3Q8N4P3 179 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 CNNM3Q8NE01 707 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 AGO4Q9HCK5 861 aaKnown RBP10.08□□□□□ -0.8
PACS1-213ENST00000533756 EBF1Q9UH73 591 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 ADAM28Q9UKQ2 775 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
PACS1-213ENST00000533756 TTC41PQ6P2S7 1318 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 ACACAQ13085 2346 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 SPDYE3A6NKU9 549 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 F8W810 466 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 NRG2O14511 850 aaPredicted RBP10.07□□□□□ -0.8
PACS1-213ENST00000533756 ZNF213O14771 459 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 GBP1P32455 592 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 MAPK8P45983 427 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 SOX9P48436 509 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 RAB33AQ14088 237 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 GRM4Q14833 912 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 PON2Q15165 354 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 TRIM61Q5EBN2 209 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 PRSS36Q5K4E3 855 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 RTP2Q5QGT7 225 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 LNX1Q8TBB1 728 aaPredicted RBP10.07□□□□□ -0.8
PACS1-213ENST00000533756 FAM167AQ96KS9 214 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 PSTPIP2Q9H939 334 aa10.07□□□□□ -0.8
PACS1-213ENST00000533756 ASCC3Q8N3C0 2202 aaKnown RBP10.06□□□□□ -0.8
PACS1-213ENST00000533756 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 TADA2AO75478 443 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 ENGP17813 658 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 VIPR2P41587 438 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 SPIRE1Q08AE8 756 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 TRIP6Q15654 476 aaKnown RBP10.06□□□□□ -0.8
PACS1-213ENST00000533756 PSMD5Q16401 504 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 PKN3Q6P5Z2 889 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 CATSPER4Q7RTX7 472 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 ZNF410Q86VK4 478 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 YAF2Q8IY57 180 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 UBAC1Q9BSL1 405 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 TTPALQ9BTX7 342 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 STK24Q9Y6E0 443 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 URB1O60287 2271 aaKnown RBP10.06□□□□□ -0.8
PACS1-213ENST00000533756 APC2O95996 2303 aa10.06□□□□□ -0.8
PACS1-213ENST00000533756 SF3B1O75533 1304 aaKnown RBP eCLIP10.06□□□□□ -0.83e-8■■■■■ 61.5
PACS1-213ENST00000533756 EML5Q05BV3 1969 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 A0A087WZ62 844 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 TEX51A0A1B0GUA7 166 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 ARL5CA6NH57 179 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 HEPACAM2A8MVW5 462 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 DDX39AO00148 427 aaKnown RBP10.05□□□□□ -0.8
PACS1-213ENST00000533756 MEIS1O00470 390 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 OPHN1O60890 802 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 FTH1P19P0C7X4 201 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 ITGA4P13612 1032 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 DPP6P42658 865 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 CYP4F3Q08477 520 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 CEP55Q53EZ4 464 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 SLC23A3Q6PIS1 610 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 TRMT1LQ7Z2T5 733 aaKnown RBP10.05□□□□□ -0.8
PACS1-213ENST00000533756 PIP4K2CQ8TBX8 421 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 PI4K2BQ8TCG2 481 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 PIGKQ92643 395 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 ZSWIM3Q96MP5 696 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 FDXACB1Q9BRP7 624 aaPredicted RBP10.05□□□□□ -0.8
PACS1-213ENST00000533756 GPR88Q9GZN0 384 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 NRBP2Q9NSY0 501 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 ZBTB40Q9NUA8 1239 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 AGPAT5Q9NUQ2 364 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 MIOSQ9NXC5 875 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 KIAA1522Q9P206 1035 aaPredicted RBP10.05□□□□□ -0.8
PACS1-213ENST00000533756 SEPT9Q9UHD8 586 aaPredicted RBP10.05□□□□□ -0.8
PACS1-213ENST00000533756 APOBEC2Q9Y235 224 aaKnown RBP10.05□□□□□ -0.8
PACS1-213ENST00000533756 TEX15Q9BXT5 2789 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 PLXNB3Q9ULL4 1909 aa10.05□□□□□ -0.8
PACS1-213ENST00000533756 ARHGEF37A1IGU5 675 aa10.04□□□□□ -0.8
PACS1-213ENST00000533756 B8ZZF3 427 aa10.04□□□□□ -0.8
PACS1-213ENST00000533756 APBB3O95704 486 aa10.04□□□□□ -0.8
PACS1-213ENST00000533756 ATXN3P54252 364 aaPredicted RBP10.04□□□□□ -0.8
PACS1-213ENST00000533756 SEC23AQ15436 765 aa10.04□□□□□ -0.8
PACS1-213ENST00000533756 MAPK6Q16659 721 aa10.04□□□□□ -0.8
PACS1-213ENST00000533756 USP39Q53GS9 565 aaKnown RBP10.04□□□□□ -0.8
PACS1-213ENST00000533756 UBXN11Q5T124 520 aa10.04□□□□□ -0.8
PACS1-213ENST00000533756 TOGARAM2Q6ZUX3 1019 aa10.04□□□□□ -0.8
PACS1-213ENST00000533756 TMPRSS7Q7RTY8 843 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms