RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 USP25Q9UHP3 1055 aa17.3■□□□□ 0.36
TSKU-204ENST00000533752 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
TSKU-204ENST00000533752 SF3B1O75533 1304 aaKnown RBP eCLIP17.29■□□□□ 0.36
TSKU-204ENST00000533752 SPTBN5Q9NRC6 3674 aaKnown RBP17.29■□□□□ 0.36
TSKU-204ENST00000533752 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.29■□□□□ 0.36
TSKU-204ENST00000533752 C2orf71A6NGG8 1288 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 GCNT3O95395 438 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 CA8P35219 290 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 OSTNP61366 133 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 ASIC1P78348 528 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 ADAM15Q13444 863 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 PPP1R10Q96QC0 940 aaKnown RBP17.29■□□□□ 0.36
TSKU-204ENST00000533752 PLEKHA5Q9HAU0 1116 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 CNTN3Q9P232 1028 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 ADAM28Q9UKQ2 775 aa17.29■□□□□ 0.36
TSKU-204ENST00000533752 A0A0B4J269 797 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 CASTOR2A6NHX0 329 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 HIDE1A8MVS5 230 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 OGTO15294 1046 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 TBX10O75333 385 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 CXCL14O95715 111 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 SLFN14P0C7P3 912 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 KCNE1P15382 129 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 GTF2F1P35269 517 aaKnown RBP eCLIP17.28■□□□□ 0.36
TSKU-204ENST00000533752 ELAVL2Q12926 359 aaKnown RBP17.28■□□□□ 0.36
TSKU-204ENST00000533752 COASYQ13057 564 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 PTPN14Q15678 1187 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 NAB2Q15742 525 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 ZC2HC1CQ53FD0 456 aaPredicted RBP17.28■□□□□ 0.36
TSKU-204ENST00000533752 GLRA4Q5JXX5 417 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
TSKU-204ENST00000533752 FUT10Q6P4F1 479 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 ALKAL1Q6UXT8 129 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 GPR65Q8IYL9 337 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 RNF168Q8IYW5 571 aaPredicted RBP17.28■□□□□ 0.36
TSKU-204ENST00000533752 ACCSQ96QU6 501 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 TSPAN18Q96SJ8 248 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 C7orf25Q9BPX7 421 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 MSTO1Q9BUK6 570 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 STRA6Q9BX79 667 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 VN1R3Q9BXE9 311 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 EMILIN2Q9BXX0 1053 aa17.28■□□□□ 0.36
TSKU-204ENST00000533752 MRPL17Q9NRX2 175 aaKnown RBP17.28■□□□□ 0.36
TSKU-204ENST00000533752 SMIM28A0A1B0GU29 152 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 A0A1W2PQ27 194 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 A0A1W2PQ64 194 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 A0A1W2PQD8 194 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 H3BQ06 376 aaPredicted RBP17.27■□□□□ 0.36
TSKU-204ENST00000533752 TMEM189-UBE2V1I3L0A0 370 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 PER2O15055 1255 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 TADA2AO75478 443 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 PFKFB1P16118 471 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 GLUD2P49448 558 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 KCNQ1P51787 676 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 CREMQ03060 361 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 POSTNQ15063 836 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 KIAA1841Q6NSI8 718 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 PPFIBP1Q86W92 1011 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 STAMQ92783 540 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 DDX27Q96GQ7 796 aaKnown RBP17.27■□□□□ 0.36
TSKU-204ENST00000533752 TMEM206Q9H813 350 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 TBC1D7Q9P0N9 293 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.36
TSKU-204ENST00000533752 STYXL1Q9Y6J8 313 aa17.27■□□□□ 0.36
TSKU-204ENST00000533752 XIRP2A4UGR9 3374 aa17.27■□□□□ 0.35
TSKU-204ENST00000533752 LINC01565O15544 149 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 EFEMP2O95967 443 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 MYL1P05976 194 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 BMP1P13497 986 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 LTBRP36941 435 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
TSKU-204ENST00000533752 POU5F1Q01860 360 aaKnown RBP17.26■□□□□ 0.35
TSKU-204ENST00000533752 SMAD4Q13485 552 aaKnown RBP17.26■□□□□ 0.35
TSKU-204ENST00000533752 USP41Q3LFD5 358 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 PTCRAQ6ISU1 281 aaPredicted RBP17.26■□□□□ 0.35
TSKU-204ENST00000533752 SLC39A4Q6P5W5 647 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 TMEM184AQ6ZMB5 413 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 UNC13DQ70J99 1090 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 CD302Q8IX05 232 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 SYCP3Q8IZU3 236 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 ADAMTS19Q8TE59 1207 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 CASP10Q92851 521 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 HAPLN2Q9GZV7 340 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 RPF1Q9H9Y2 349 aaKnown RBP17.26■□□□□ 0.35
TSKU-204ENST00000533752 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.26■□□□□ 0.35
TSKU-204ENST00000533752 CD207Q9UJ71 328 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 CITO14578 2027 aa17.26■□□□□ 0.35
TSKU-204ENST00000533752 UBE4BO95155 1302 aa17.25■□□□□ 0.35
TSKU-204ENST00000533752 NCOR1O75376 2440 aa17.25■□□□□ 0.35
TSKU-204ENST00000533752 FAM237AA0A1B0GTK4 181 aa17.25■□□□□ 0.35
TSKU-204ENST00000533752 A0A1B0GVL5 298 aa17.25■□□□□ 0.35
TSKU-204ENST00000533752 PVALEFA0A1B0GWK0 134 aa17.25■□□□□ 0.35
TSKU-204ENST00000533752 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
TSKU-204ENST00000533752 XPOTO43592 962 aaKnown RBP17.25■□□□□ 0.35
TSKU-204ENST00000533752 ACTN4O43707 911 aaKnown RBP17.25■□□□□ 0.35
TSKU-204ENST00000533752 FAM189A1O60320 539 aa17.25■□□□□ 0.35
TSKU-204ENST00000533752 CLASP2O75122 1294 aaKnown RBP17.25■□□□□ 0.35
TSKU-204ENST00000533752 KIF4AO95239 1232 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms