RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 KCNK12Q9HB15 430 aa6.88□□□□□ -1.31
SOX6-216ENST00000533658 RTEL1Q9NZ71 1219 aa6.88□□□□□ -1.31
SOX6-216ENST00000533658 DDX41Q9UJV9 622 aaKnown RBP6.88□□□□□ -1.31
SOX6-216ENST00000533658 CYP8B1Q9UNU6 501 aa6.88□□□□□ -1.31
SOX6-216ENST00000533658 PCDHA1Q9Y5I3 950 aa6.88□□□□□ -1.31
SOX6-216ENST00000533658 MRVI1Q9Y6F6 885 aa6.88□□□□□ -1.31
SOX6-216ENST00000533658 CFAP54Q96N23 3096 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 TRIOO75962 3097 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 E7EWF7 191 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 ETV2O00321 342 aaPredicted RBP6.87□□□□□ -1.31
SOX6-216ENST00000533658 LPXNO60711 386 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 NBNO60934 754 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 CSPG5O95196 566 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 GGPS1O95749 300 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 BMP6P22004 513 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 EIF4BP23588 611 aaKnown RBP6.87□□□□□ -1.31
SOX6-216ENST00000533658 STXBP2Q15833 593 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 KIAA0753Q2KHM9 967 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 HSDL1Q3SXM5 330 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 ASPRV1Q53RT3 343 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 ZNF618Q5T7W0 954 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 HERC6Q8IVU3 1022 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 RPUSD2Q8IZ73 545 aaKnown RBP6.87□□□□□ -1.31
SOX6-216ENST00000533658 KCT2Q8NC54 265 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 NSUN6Q8TEA1 469 aaKnown RBP6.87□□□□□ -1.31
SOX6-216ENST00000533658 GDPD5Q8WTR4 605 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 ISL2Q96A47 359 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 UIMC1Q96RL1 719 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 SLC9A7Q96T83 725 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 PDCD2LQ9BRP1 358 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 SEZ6LQ9BYH1 1024 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 PCDHA4Q9UN74 947 aa6.87□□□□□ -1.31
SOX6-216ENST00000533658 MRPL11Q9Y3B7 192 aaKnown RBP6.87□□□□□ -1.31
SOX6-216ENST00000533658 COL4A4P53420 1690 aaPredicted RBP6.87□□□□□ -1.31
SOX6-216ENST00000533658 RAD50Q92878 1312 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 LAMA4Q16363 1823 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 PI4K2BG5E9Z4 385 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 ZBTB5O15062 677 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 PLEKHA8P1O95397 391 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 CTSHP09668 335 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 SUPT20HL2P0C7V6 817 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 CKBP12277 381 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 UBA1P22314 1058 aaKnown RBP6.86□□□□□ -1.31
SOX6-216ENST00000533658 MRE11P49959 708 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 HSD17B4P51659 736 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 WDR5P61964 334 aaKnown RBP6.86□□□□□ -1.31
SOX6-216ENST00000533658 GRM4Q14833 912 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 PGM5Q15124 567 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 PPM1JQ5JR12 505 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 PCNX4Q63HM2 1172 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 NFRKBQ6P4R8 1299 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 USP17L6PQ6QN14 398 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.86□□□□□ -1.31
SOX6-216ENST00000533658 SPACA3Q8IXA5 215 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 DHX37Q8IY37 1157 aaKnown RBP6.86□□□□□ -1.31
SOX6-216ENST00000533658 C7orf31Q8N865 590 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 TCEANC2Q96MN5 208 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 SPATA33Q96N06 139 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 AMNQ9BXJ7 453 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 KRT23Q9C075 422 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 C19orf73Q9NVV2 129 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 USP34Q70CQ2 3546 aa6.86□□□□□ -1.31
SOX6-216ENST00000533658 TET1Q8NFU7 2136 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 PRR33A8MZF0 331 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 HIP1O00291 1037 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 NKRFO15226 690 aaKnown RBP eCLIP6.85□□□□□ -1.31
SOX6-216ENST00000533658 SGSM2O43147 1006 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 PRPF40AO75400 957 aaKnown RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 PAGE1O75459 146 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 PCP11498 1178 aaKnown RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 ACTN1P12814 892 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 CASTP20810 708 aaKnown RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 GNA15P30679 374 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 THPOP40225 353 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 MRPS9P82933 396 aaKnown RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 TROAPQ12815 778 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 WTAPQ15007 396 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 DGKDQ16760 1214 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 UBE2SQ16763 222 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 TRIM71Q2Q1W2 868 aaKnown RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 BRDTQ58F21 947 aaPredicted RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 CELF3Q5SZQ8 465 aaKnown RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 UTP14CQ5TAP6 766 aaKnown RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 SV2BQ7L1I2 683 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 LRRC8DQ7L1W4 858 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 C12orf40Q86WS4 652 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 MCF2L2Q86YR7 1114 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 TOP6BLQ8N6T0 577 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 PHOSPHO2Q8TCD6 241 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 GRIN3AQ8TCU5 1115 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 IGDCC4Q8TDY8 1250 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 MTMR8Q96EF0 704 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 PGBD1Q96JS3 809 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 IRF2BPLQ9H1B7 796 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 UBE2ZQ9H832 354 aaPredicted RBP6.85□□□□□ -1.31
SOX6-216ENST00000533658 CNNM2Q9H8M5 875 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 GTF2IRD1Q9UHL9 959 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 CTNNA3Q9UI47 895 aa6.85□□□□□ -1.31
SOX6-216ENST00000533658 RBM8AQ9Y5S9 174 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms