RNA–Protein interactions for RNA: ENST00000533559.5

FNTA-213, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-213ENST00000533559 IFT81Q8WYA0 676 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 KCNN1Q92952 543 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 C12orf42Q96LP6 360 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 NT5C1BQ96P26 610 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 UIMC1Q96RL1 719 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 PSMB7Q99436 277 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 PDCD2LQ9BRP1 358 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 STMN4Q9H169 189 aaPredicted RBP8.35□□□□□ -1.07
FNTA-213ENST00000533559 UBE2TQ9NPD8 197 aaPredicted RBP8.35□□□□□ -1.07
FNTA-213ENST00000533559 KMT5AQ9NQR1 393 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 FBXO40Q9UH90 709 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 DMGDHQ9UI17 866 aaKnown RBP8.35□□□□□ -1.07
FNTA-213ENST00000533559 SALL4Q9UJQ4 1053 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 ZNF112Q9UJU3 913 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 TBX20Q9UMR3 447 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 NOC2LQ9Y3T9 749 aaKnown RBP8.35□□□□□ -1.07
FNTA-213ENST00000533559 PCDHGA4Q9Y5G9 962 aa8.35□□□□□ -1.07
FNTA-213ENST00000533559 EMSYQ7Z589 1322 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 IGSF9BQ9UPX0 1349 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 DNAH12Q6ZR08 3092 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 MYH10P35580 1976 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 A0A0G2JLL6 359 aaPredicted RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 CCDC169A6NNP5 214 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 DDX39AO00148 427 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 VWA5AO00534 786 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 NFIBO00712 420 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 NDC80O14777 642 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 TNPO2O14787 897 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 SHOX2O60902 331 aaPredicted RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 PHACTR2O75167 634 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 TFRCP02786 760 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 SLURP2P0DP57 97 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 MYCLP12524 364 aaPredicted RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 VCAM1P19320 739 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 CHRNA3P32297 505 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 COPB2P35606 906 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 HSPA9P38646 679 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 CETN2P41208 172 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 FLT3LGP49771 235 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 GPC3P51654 580 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 AP3M2P53677 418 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 DRG2P55039 364 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 PEX3P56589 373 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 SKOR1P84550 965 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 MAPK7Q13164 816 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 COG2Q14746 738 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 SNRNP35Q16560 246 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 ARHGAP44Q17R89 818 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 CBWD6Q4V339 395 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 EPC2Q52LR7 807 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 DNAJC21Q5F1R6 531 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 WDR44Q5JSH3 913 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 CBWD3Q5JTY5 395 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 CBWD5Q5RIA9 395 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 EMC10Q5UCC4 262 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 TRIM72Q6ZMU5 477 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 GADL1Q6ZQY3 521 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 PRRT2Q7Z6L0 340 aaPredicted RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 VSIG10LQ86VR7 867 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 HOOK3Q86VS8 718 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 GLYCTKQ8IVS8 523 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 FBXL13Q8NEE6 735 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 DNERQ8NFT8 737 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 DIS3LQ8TF46 1054 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 KHSRPQ92945 711 aaKnown RBP eCLIP8.34□□□□□ -1.073e-7■■■■□ 24.1
FNTA-213ENST00000533559 MARVELD3Q96A59 401 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 DEFB118Q96PH6 123 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 TEX13BQ9BXU2 312 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 CAPS2Q9BXY5 557 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 PACSIN1Q9BY11 444 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 RPAP3Q9H6T3 665 aaPredicted RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 ACAD9Q9H845 621 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 ATP6V0A4Q9HBG4 840 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 RAVER2Q9HCJ3 691 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 HOMER3Q9NSC5 361 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 RNF146Q9NTX7 359 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 CTTNBP2NLQ9P2B4 639 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 MTRF1LQ9UGC7 380 aaKnown RBP8.34□□□□□ -1.07
FNTA-213ENST00000533559 NFU1Q9UMS0 254 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 STXBP5LQ9Y2K9 1186 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 COQ4Q9Y3A0 265 aa8.34□□□□□ -1.07
FNTA-213ENST00000533559 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.34□□□□□ -1.07
FNTA-213ENST00000533559 VCANP13611 3396 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 ZNF233A6NK53 670 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 EBAG9O00559 213 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 RAD51CO43502 376 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 ZEB2O60315 1214 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 ZMYND10O75800 440 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 GLI1P08151 1106 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 NR3C2P08235 984 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 TRIM49P0CI25 452 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 TRIM49CP0CI26 452 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 EIF2AK2P19525 551 aaKnown RBP8.33□□□□□ -1.08
FNTA-213ENST00000533559 CNGA1P29973 690 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 SLC1A1P43005 524 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 HNRNPH2P55795 449 aaKnown RBP8.33□□□□□ -1.08
FNTA-213ENST00000533559 PTENP60484 403 aa8.33□□□□□ -1.08
FNTA-213ENST00000533559 MRPS9P82933 396 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms