RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 RHOBTB2Q9BYZ6 727 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 HAPLN2Q9GZV7 340 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 ENTPD7Q9NQZ7 604 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 SLC38A7Q9NVC3 462 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 ADAM28Q9UKQ2 775 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 VWA8A3KMH1 1905 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 A0A0B4J269 797 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 SMIM28A0A1B0GU29 152 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 TTC26A0AVF1 554 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 K7ENM7 598 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 LINC01565O15544 149 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 MBTPS2O43462 519 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 CLASP2O75122 1294 aaKnown RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 CMA1P23946 247 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 GTF2F1P35269 517 aaKnown RBP eCLIP10.76□□□□□ -0.69
NUP98-220ENST00000533346 OR1G1P47890 313 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 KCNQ1P51787 676 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 KRT85P78386 507 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 EHHADHQ08426 723 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 ELAVL2Q12926 359 aaKnown RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 SMAD4Q13485 552 aaKnown RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 DHX8Q14562 1220 aaKnown RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 HSP90AA2PQ14568 343 aaPredicted RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 SMAD2Q15796 467 aaKnown RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 ZBTB6Q15916 424 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 UPP1Q16831 310 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 TMEM132AQ24JP5 1023 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 SLC10A6Q3KNW5 377 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 PLPP4Q5VZY2 271 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 SLFN12LQ6IEE8 588 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 DCLRE1AQ6PJP8 1040 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 CD302Q8IX05 232 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 CEP120Q8N960 986 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 SMRP1Q8NCR6 262 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 ADAMTS19Q8TE59 1207 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 HDAC7Q8WUI4 952 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 SUSD6Q92537 303 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 CASP10Q92851 521 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 DDX27Q96GQ7 796 aaKnown RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 ZBTB45Q96K62 511 aaPredicted RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 SNX27Q96L92 541 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 TCHPQ9BT92 498 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 APOL6Q9BWW8 343 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 TRIM9Q9C026 710 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 SCAND2PQ9GZW5 306 aaPredicted RBP10.76□□□□□ -0.69
NUP98-220ENST00000533346 GBP3Q9H0R5 595 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 S1PR5Q9H228 398 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 CXCL16Q9H2A7 254 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.76□□□□□ -0.69
NUP98-220ENST00000533346 FAM13BQ9NYF5 915 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 KLK14Q9P0G3 267 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 FNIP2Q9P278 1114 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 CD207Q9UJ71 328 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 HPSEQ9Y251 543 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 PCDHGC5Q9Y5F6 944 aa10.76□□□□□ -0.69
NUP98-220ENST00000533346 C19orf67A6NJJ6 358 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 OGTO15294 1046 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 MEFVO15553 781 aaPredicted RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 MYL1P05976 194 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 CLTAP09496 248 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 LIG1P18858 919 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 CYP3A5P20815 502 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 PAX3P23760 479 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 NMT1P30419 496 aaKnown RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 RPL9P32969 192 aaKnown RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 LIG4P49917 911 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 NUCB2P80303 420 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 POSTNQ15063 836 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 USP41Q3LFD5 358 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 PTCRAQ6ISU1 281 aaPredicted RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 ANKRD54Q6NXT1 300 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 FUT10Q6P4F1 479 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 SLC39A4Q6P5W5 647 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 CD300LGQ6UXG3 332 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 DYMQ7RTS9 669 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 CCDC65Q8IXS2 484 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 SPRYD3Q8NCJ5 442 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 VN1R2Q8NFZ6 395 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 LEO1Q8WVC0 666 aaPredicted RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 ZMAT2Q96NC0 199 aaKnown RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 NECAB3Q96P71 396 aaPredicted RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 KLHL5Q96PQ7 755 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 EMILIN2Q9BXX0 1053 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 GPR62Q9BZJ7 368 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 MRPL17Q9NRX2 175 aaKnown RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 USP25Q9UHP3 1055 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 CPSF3Q9UKF6 684 aaKnown RBP10.75□□□□□ -0.69
NUP98-220ENST00000533346 GDAQ9Y2T3 454 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 PCDHB13Q9Y5F0 798 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 HCFC2Q9Y5Z7 792 aa10.75□□□□□ -0.69
NUP98-220ENST00000533346 PLXNA3P51805 1871 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 PVALEFA0A1B0GWK0 134 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 A0A1W2PQ27 194 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 A0A1W2PQ64 194 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 A0A1W2PQD8 194 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 HNRNPDLO14979 420 aaKnown RBP10.74□□□□□ -0.69
NUP98-220ENST00000533346 PER2O15055 1255 aa10.74□□□□□ -0.69
NUP98-220ENST00000533346 KIAA0391O15091 583 aaKnown RBP10.74□□□□□ -0.69
NUP98-220ENST00000533346 TADA2AO75478 443 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms