RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SERTAD1Q9UHV2 236 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 IRAK3Q9Y616 596 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 SMIM28A0A1B0GU29 152 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 HIDE1A8MVS5 230 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 ANKRD63C9JTQ0 380 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 F8W810 466 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 NR1I2O75469 434 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 MYBP10242 640 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 CTSAP10619 480 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 KCNE1P15382 129 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 MRPS5P82675 430 aaKnown RBP22.34■■□□□ 1.17
CCS-208ENST00000533244 SMC1AQ14683 1233 aaKnown RBP22.34■■□□□ 1.17
CCS-208ENST00000533244 DUSP6Q16828 381 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 MRPL43Q8N983 215 aaKnown RBP22.34■■□□□ 1.17
CCS-208ENST00000533244 CDCA3Q99618 268 aaPredicted RBP22.34■■□□□ 1.17
CCS-208ENST00000533244 PAAF1Q9BRP4 392 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 COLEC11Q9BWP8 271 aa22.34■■□□□ 1.17
CCS-208ENST00000533244 PDCD11Q14690 1871 aaKnown RBP22.34■■□□□ 1.17
CCS-208ENST00000533244 OGTO15294 1046 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 GCNT3O95395 438 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 LTBRP36941 435 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 NRIP1P48552 1158 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 ASIC1P78348 528 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 KCNA1Q09470 495 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 ADAM15Q13444 863 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 KYAT1Q16773 422 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 SLC10A6Q3KNW5 377 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 SEZ6Q53EL9 994 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 GLRA4Q5JXX5 417 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 UNC13DQ70J99 1090 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 CEP57L1Q8IYX8 460 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 EFHBQ8N7U6 833 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 ZMAT2Q96NC0 199 aaKnown RBP22.33■■□□□ 1.17
CCS-208ENST00000533244 ASB2Q96Q27 587 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 IKZF4Q9H2S9 585 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 TLE6Q9H808 572 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 CACNG4Q9UBN1 327 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 PCDHB13Q9Y5F0 798 aa22.33■■□□□ 1.17
CCS-208ENST00000533244 C2orf71A6NGG8 1288 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 TISP43B9A030 160 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 SOD2P04179 222 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 CLTAP09496 248 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 CASP1P29466 404 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 NDUFA8P51970 172 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 KCNC3Q14003 757 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 HSP90AA2PQ14568 343 aaPredicted RBP22.32■■□□□ 1.16
CCS-208ENST00000533244 AAK1Q2M2I8 961 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 ACCSQ96QU6 501 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 HERC2P3Q9BVR0 1158 aa22.32■■□□□ 1.16
CCS-208ENST00000533244 PVALEFA0A1B0GWK0 134 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 FSD2A1L4K1 749 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 CASTOR2A6NHX0 329 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 LINC01565O15544 149 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 GLP2RO95838 553 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 ADRB2P07550 413 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 TNFSF9P41273 254 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 MATR3P43243 847 aaKnown RBP eCLIP22.31■■□□□ 1.16
CCS-208ENST00000533244 SYKP43405 635 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 AFMP43652 599 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 CUL4BQ13620 913 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 LEXMQ3ZCV2 418 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 ZBTB41Q5SVQ8 909 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 SLFN12LQ6IEE8 588 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 RBM23Q86U06 439 aaKnown RBP22.31■■□□□ 1.16
CCS-208ENST00000533244 GRAMD1CQ8IYS0 662 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 FSIP1Q8NA03 581 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 HPS3Q969F9 1004 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 PAGE5Q96GU1 130 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 MSTO1Q9BUK6 570 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 BLZF1Q9H2G9 400 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 GOLPH3LQ9H4A5 285 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 IGFLR1Q9H665 355 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 PLEKHA5Q9HAU0 1116 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 CLDND1Q9NY35 253 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 ADAM28Q9UKQ2 775 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 EXOC7Q9UPT5 735 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 VCANP13611 3396 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 TTC26A0AVF1 554 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 TMEM189-UBE2V1I3L0A0 370 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 PER2O15055 1255 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 LILRB3O75022 631 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 TBX10O75333 385 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 CXCL8P10145 99 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 KCNA5P22460 613 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 ADSSP30520 456 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 SOX4Q06945 474 aaPredicted RBP22.31■■□□□ 1.16
CCS-208ENST00000533244 BMS1Q14692 1282 aaKnown RBP22.31■■□□□ 1.16
CCS-208ENST00000533244 PTPN14Q15678 1187 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 TJAP1Q5JTD0 557 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 EPM2AIP1Q7L775 607 aaPredicted RBP22.31■■□□□ 1.16
CCS-208ENST00000533244 GLIS3Q8NEA6 775 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 RABGGTAQ92696 567 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 UROC1Q96N76 676 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 SLC38A7Q9NVC3 462 aa22.31■■□□□ 1.16
CCS-208ENST00000533244 CPSF3Q9UKF6 684 aaKnown RBP22.31■■□□□ 1.16
CCS-208ENST00000533244 KIF4AO95239 1232 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 CXCL14O95715 111 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 ANP32AP39687 249 aaKnown RBP22.3■■□□□ 1.16
CCS-208ENST00000533244 DLX2Q07687 328 aaPredicted RBP22.3■■□□□ 1.16
CCS-208ENST00000533244 ENOX2Q16206 610 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms