RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 ZNF446Q9NWS9 450 aa7.36□□□□□ -1.23
TGFBR3-210ENST00000533089 SLC8A2Q9UPR5 921 aa7.36□□□□□ -1.23
TGFBR3-210ENST00000533089 KIAA1024Q9UPX6 916 aa7.36□□□□□ -1.23
TGFBR3-210ENST00000533089 KIF13AQ9H1H9 1805 aa7.36□□□□□ -1.23
TGFBR3-210ENST00000533089 UBR1Q8IWV7 1749 aa7.36□□□□□ -1.23
TGFBR3-210ENST00000533089 RNF103-CHMP3A0A140T963 221 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 TRIM64A6NGJ6 449 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 TRIM64BA6NI03 449 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 M0R3G1 203 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 AXIN1O15169 862 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CNOT3O75175 753 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CALB1P05937 261 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ETS2P15036 469 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CASP5P51878 434 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 COPB1P53618 953 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 PTK2Q05397 1052 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 HLFQ16534 295 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CCNYQ8ND76 341 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 PIGOQ8TEQ8 1089 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 HPS1Q92902 700 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 PGBD1Q96JS3 809 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 PRPF18Q99633 342 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 AMNQ9BXJ7 453 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CYP4F11Q9HBI6 524 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 USP46P62068 366 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 KRT17Q04695 432 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CUL1Q13616 776 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 LRRC49Q8IUZ0 686 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 PSPC1Q8WXF1 523 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 UPF3AQ9H1J1 476 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ATP8B3O60423 1300 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ZMYM6O95789 1325 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 C21orf2O43822 256 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 SRGAP2BP0DMP2 458 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 TFAMQ00059 246 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 RASGRF1Q13972 1273 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CTTNQ14247 550 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 KRT31Q15323 416 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 MAPK11Q15759 364 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 LPCAT2Q7L5N7 544 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 SNX32Q86XE0 403 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 NOSTRINQ8IVI9 506 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 VSTM4Q8IW00 320 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ZNF579Q8NAF0 562 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 RBM46Q8TBY0 533 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CUEDC2Q9H467 287 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 PARVGQ9HBI0 331 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 PALD1Q9ULE6 856 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 C1orf232A0A0U1RR37 186 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 DDAH1O94760 285 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 EIF2S1P05198 315 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ATF2P15336 505 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 CCR3P51677 355 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 MTERF2Q49AM1 385 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 MYCBPAPQ8TBZ2 947 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 WDR24Q96S15 920 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 PUS3Q9BZE2 481 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 RANBP17Q9H2T7 1088 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 COMMD3-BMI1R4GMX3 469 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 SGK1O00141 431 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ADCY6O43306 1168 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 TTLL1O95922 423 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ENO2P09104 434 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 MCL1Q07820 350 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 NFIXQ14938 502 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ANGPT1Q15389 498 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 DPCR1Q3MIW9 517 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 TBC1D9BQ66K14 1250 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ADALQ6DHV7 355 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 IRGCQ6NXR0 463 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 LLGL2Q6P1M3 1020 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 C2orf69Q8N8R5 385 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 GINS4Q9BRT9 223 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 DCUN1D5Q9BTE7 237 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ISCA1Q9BUE6 129 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 COA1Q9GZY4 146 aa7.35□□□□□ -1.23
TGFBR3-210ENST00000533089 ESYT3A0FGR9 886 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 LZTS3O60299 673 aaPredicted RBP7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 TRIM49P0CI25 452 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 TRIM49CP0CI26 452 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 CHN1P15882 459 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 CA4P22748 312 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 PHKA1P46020 1223 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 YWHAGP61981 247 aaKnown RBP eCLIP7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 ITGADQ13349 1161 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 THOC5Q13769 683 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 STK32CQ86UX6 486 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 C11orf74Q86VG3 221 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 CEP170P1Q96L14 293 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 ADNPQ9H2P0 1102 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 PCIF1Q9H4Z3 704 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 MRPL39Q9NYK5 338 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 COL5A2P05997 1499 aaPredicted RBP7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 MYO3BQ8WXR4 1341 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 PRR23D1E9PI22 279 aaPredicted RBP7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 AGRPO00253 132 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 PRR23D2P0DMB1 279 aaPredicted RBP7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 MFAP3P55082 362 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 ANO4Q32M45 955 aa7.34□□□□□ -1.23
TGFBR3-210ENST00000533089 CIAPIN1Q6FI81 312 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms