RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 IGSF9Q9P2J2 1179 aa19.59■□□□□ 0.73
PCF11-206ENST00000533018 MYH11P35749 1972 aa19.58■□□□□ 0.73
PCF11-206ENST00000533018 N4BP1O75113 896 aaKnown RBP19.58■□□□□ 0.72
PCF11-206ENST00000533018 HIP1RO75146 1068 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 C1RP00736 705 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 NPTX2P47972 431 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 YARSP54577 528 aaKnown RBP19.58■□□□□ 0.72
PCF11-206ENST00000533018 OSTNP61366 133 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 ELAVL2Q12926 359 aaKnown RBP19.58■□□□□ 0.72
PCF11-206ENST00000533018 DMP1Q13316 513 aaPredicted RBP19.58■□□□□ 0.72
PCF11-206ENST00000533018 LIN9Q5TKA1 542 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 ASTLQ6HA08 431 aaPredicted RBP19.58■□□□□ 0.72
PCF11-206ENST00000533018 LILRA6Q6PI73 481 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 GET4Q7L5D6 327 aaPredicted RBP19.58■□□□□ 0.72
PCF11-206ENST00000533018 TMEM105Q8N8V8 129 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 RSAD2Q8WXG1 361 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 ZNF707Q96C28 371 aaPredicted RBP19.58■□□□□ 0.72
PCF11-206ENST00000533018 PRKD2Q9BZL6 878 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 DOCK6Q96HP0 2047 aa19.58■□□□□ 0.72
PCF11-206ENST00000533018 H3BQV1 296 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 STK25O00506 426 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 B3GAT3O94766 335 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 PRPHP41219 470 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 NUBP1P53384 320 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 NAB2Q15742 525 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 IL17AQ16552 155 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 LNX1Q8TBB1 728 aaPredicted RBP19.57■□□□□ 0.72
PCF11-206ENST00000533018 PIK3R5Q8WYR1 880 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 DRC1Q96MC2 740 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 CLSTN3Q9BQT9 956 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 TCHPQ9BT92 498 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 CCDC94Q9BW85 323 aaPredicted RBP19.57■□□□□ 0.72
PCF11-206ENST00000533018 RHOBTB2Q9BYZ6 727 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 KMT5AQ9NQR1 393 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.57■□□□□ 0.72
PCF11-206ENST00000533018 DUSP12Q9UNI6 340 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 TNFSF13BQ9Y275 285 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 VWA8A3KMH1 1905 aa19.57■□□□□ 0.72
PCF11-206ENST00000533018 DOCK8Q8NF50 2099 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 ZFHX2Q9C0A1 2572 aaPredicted RBP19.56■□□□□ 0.72
PCF11-206ENST00000533018 PHLPP2Q6ZVD8 1323 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 GALR2O43603 387 aaPredicted RBP19.56■□□□□ 0.72
PCF11-206ENST00000533018 ZMYND10O75800 440 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 CFHP08603 1231 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 RFX1P22670 979 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 CLCNKBP51801 687 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 RAD51AP2Q09MP3 1159 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 ZNF568Q3ZCX4 644 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 RILPL1Q5EBL4 403 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 RINT1Q6NUQ1 792 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 PDXDC1Q6P996 788 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 MYADMQ96S97 322 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 ACO2Q99798 780 aaKnown RBP19.56■□□□□ 0.72
PCF11-206ENST00000533018 RUSC1Q9BVN2 902 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 MRPL4Q9BYD3 311 aaKnown RBP19.56■□□□□ 0.72
PCF11-206ENST00000533018 TOPORSQ9NS56 1045 aaPredicted RBP19.56■□□□□ 0.72
PCF11-206ENST00000533018 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.56■□□□□ 0.724e-18■□□□□ 11.2
PCF11-206ENST00000533018 DAXXQ9UER7 740 aaPredicted RBP19.56■□□□□ 0.72
PCF11-206ENST00000533018 POLIQ9UNA4 740 aa19.56■□□□□ 0.72
PCF11-206ENST00000533018 DMDP11532 3685 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 SFI1A8K8P3 1242 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 NARSO43776 548 aaKnown RBP19.55■□□□□ 0.72
PCF11-206ENST00000533018 HARSP12081 509 aaKnown RBP19.55■□□□□ 0.72
PCF11-206ENST00000533018 PPM1LQ5SGD2 360 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 DCLRE1AQ6PJP8 1040 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.55■□□□□ 0.72
PCF11-206ENST00000533018 SIX5Q8N196 739 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 CEP120Q8N960 986 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 UROC1Q96N76 676 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 PPP1R10Q96QC0 940 aaKnown RBP19.55■□□□□ 0.72
PCF11-206ENST00000533018 PLIN2Q99541 437 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 TMEM134Q9H6X4 195 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 UPF2Q9HAU5 1272 aaKnown RBP19.55■□□□□ 0.72
PCF11-206ENST00000533018 GOLGA2P5Q9HBQ8 144 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 EPS15L1Q9UBC2 864 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 FBXW11Q9UKB1 542 aa19.55■□□□□ 0.72
PCF11-206ENST00000533018 RBM19Q9Y4C8 960 aaKnown RBP19.55■□□□□ 0.72
PCF11-206ENST00000533018 CITO14578 2027 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 SMIM28A0A1B0GU29 152 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 VWA3AA6NCI4 1184 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 SLC16A4O15374 487 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 TRAPPC3O43617 180 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 C8AP07357 584 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 FSHRP23945 695 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 GJB2P29033 226 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 OR1D2P34982 312 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 CLCN5P51795 746 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 C1orf186Q6ZWK4 172 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 KCNK18Q7Z418 384 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 GRASPQ7Z6J2 395 aaPredicted RBP19.54■□□□□ 0.72
PCF11-206ENST00000533018 DAW1Q8N136 415 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 ST13P5Q8NFI4 369 aaPredicted RBP19.54■□□□□ 0.72
PCF11-206ENST00000533018 CDK5RAP3Q96JB5 506 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 TMX3Q96JJ7 454 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 MMTAG2Q9BU76 263 aaKnown RBP19.54■□□□□ 0.72
PCF11-206ENST00000533018 TARS2Q9BW92 718 aaKnown RBP19.54■□□□□ 0.72
PCF11-206ENST00000533018 CDT1Q9H211 546 aa19.54■□□□□ 0.72
PCF11-206ENST00000533018 CCL16O15467 120 aa19.53■□□□□ 0.72
PCF11-206ENST00000533018 ADAM12O43184 909 aa19.53■□□□□ 0.72
PCF11-206ENST00000533018 LAMP2P13473 410 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms