RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 FNIP2Q9P278 1114 aa20.81■□□□□ 0.92
SSH3-209ENST00000532600 MTCL1Q9Y4B5 1905 aaKnown RBP20.8■□□□□ 0.92
SSH3-209ENST00000532600 MYH11P35749 1972 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 RFPL2O75678 378 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 PAPLNO95428 1278 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 GLUD1P00367 558 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 GRM5P41594 1212 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 CACNB1Q02641 598 aaPredicted RBP20.8■□□□□ 0.92
SSH3-209ENST00000532600 XKR4Q5GH76 650 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 PALB2Q86YC2 1186 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 GLYCTKQ8IVS8 523 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 TMEM161BQ8NDZ6 487 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 CMASQ8NFW8 434 aaPredicted RBP20.8■□□□□ 0.92
SSH3-209ENST00000532600 ZNF707Q96C28 371 aaPredicted RBP20.8■□□□□ 0.92
SSH3-209ENST00000532600 ZBTB45Q96K62 511 aaPredicted RBP20.8■□□□□ 0.92
SSH3-209ENST00000532600 BLOC1S4Q9NUP1 217 aa20.8■□□□□ 0.92
SSH3-209ENST00000532600 SF3B1O75533 1304 aaKnown RBP eCLIP20.79■□□□□ 0.92
SSH3-209ENST00000532600 TGM5O43548 720 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 N4BP1O75113 896 aaKnown RBP20.79■□□□□ 0.92
SSH3-209ENST00000532600 ASGR2P07307 311 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 PLS3P13797 630 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 SOX4Q06945 474 aaPredicted RBP20.79■□□□□ 0.92
SSH3-209ENST00000532600 SIGLEC14Q08ET2 396 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 C15orf39Q6ZRI6 1047 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 ZBTB33Q86T24 672 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 ZDHHC14Q8IZN3 488 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 KCTD17Q8N5Z5 321 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 KREMEN2Q8NCW0 462 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 LNX1Q8TBB1 728 aaPredicted RBP20.79■□□□□ 0.92
SSH3-209ENST00000532600 SPIRE2Q8WWL2 714 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 FAM122AQ96E09 287 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 ZMAT2Q96NC0 199 aaKnown RBP20.79■□□□□ 0.92
SSH3-209ENST00000532600 CLSTN3Q9BQT9 956 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 TIPINQ9BVW5 301 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 MRPL4Q9BYD3 311 aaKnown RBP20.79■□□□□ 0.92
SSH3-209ENST00000532600 NT5C3AQ9H0P0 336 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 C17orf75Q9HAS0 396 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 GOLGA2P5Q9HBQ8 144 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 USTQ9Y2C2 406 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 KMT2EQ8IZD2 1858 aa20.79■□□□□ 0.92
SSH3-209ENST00000532600 WDFY4Q6ZS81 3184 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 SMIM28A0A1B0GU29 152 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 CCDC195A0A1B0GUA6 201 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 ADAM12O43184 909 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 BRD1O95696 1058 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 MAPTP10636 758 aaKnown RBP20.78■□□□□ 0.92
SSH3-209ENST00000532600 OSTNP61366 133 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 SF3A1Q15459 793 aaKnown RBP20.78■□□□□ 0.92
SSH3-209ENST00000532600 ZNF568Q3ZCX4 644 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 FAM171A1Q5VUB5 890 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 BRAPQ7Z569 592 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 TDRD5Q8NAT2 981 aaKnown RBP20.78■□□□□ 0.92
SSH3-209ENST00000532600 C3orf58Q8NDZ4 430 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 AK8Q96MA6 479 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.78■□□□□ 0.92
SSH3-209ENST00000532600 LIMD1Q9UGP4 676 aa20.78■□□□□ 0.92
SSH3-209ENST00000532600 RBM19Q9Y4C8 960 aaKnown RBP20.78■□□□□ 0.92
SSH3-209ENST00000532600 MCF2P10911 925 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 CLCNKBP51801 687 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 FAM173BQ6P4H8 233 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 PIK3R5Q8WYR1 880 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 PBXIP1Q96AQ6 731 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 SNX27Q96L92 541 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 TTPALQ9BTX7 342 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 RHOBTB2Q9BYZ6 727 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 HAPLN2Q9GZV7 340 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 CLIC4Q9Y696 253 aa20.77■□□□□ 0.92
SSH3-209ENST00000532600 TMEM189-UBE2V1I3L0A0 370 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 C1RP00736 705 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 PDGFBP01127 241 aaPredicted RBP20.76■□□□□ 0.91
SSH3-209ENST00000532600 KARSQ15046 597 aaKnown RBP20.76■□□□□ 0.91
SSH3-209ENST00000532600 PTPAQ15257 358 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 UPP1Q16831 310 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 FOXD4L5Q5VV16 416 aaPredicted RBP20.76■□□□□ 0.91
SSH3-209ENST00000532600 MPZL3Q6UWV2 235 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 CCDC149Q6ZUS6 474 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 USP49Q70CQ1 688 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 HDAC7Q8WUI4 952 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 FOXD4L4Q8WXT5 416 aaPredicted RBP20.76■□□□□ 0.91
SSH3-209ENST00000532600 MFSD14AQ96MC6 490 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 REEP2Q9BRK0 252 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 KCND2Q9NZV8 630 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 SORCS3Q9UPU3 1222 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 ZDHHC9Q9Y397 364 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 ZDBF2Q9HCK1 2354 aa20.76■□□□□ 0.91
SSH3-209ENST00000532600 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
SSH3-209ENST00000532600 SPDYE4A6NLX3 237 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 SLC26A4O43511 780 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 PLCG1P19174 1290 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 FGFR3P22607 806 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 DDIT3P35638 169 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 NCKAP1LP55160 1127 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 PSMD5Q16401 504 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 SEZ6Q53EL9 994 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 IER5LQ5T953 404 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 RSPO2Q6UXX9 243 aaPredicted RBP20.75■□□□□ 0.91
SSH3-209ENST00000532600 CEP57Q86XR8 500 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 TMEM130Q8N3G9 435 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 CDK5RAP3Q96JB5 506 aa20.75■□□□□ 0.91
SSH3-209ENST00000532600 CCDC94Q9BW85 323 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms