RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 ELAVL2Q12926 359 aaKnown RBP14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 GNL2Q13823 731 aaKnown RBP14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 NBR1Q14596 966 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 DCAF4L1Q3SXM0 396 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 NT5DC1Q5TFE4 455 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 USP34Q70CQ2 3546 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 ASCL5Q7RTU5 278 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 DENND4AQ7Z401 1863 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 FRMD5Q7Z6J6 570 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 CCDC105Q8IYK2 499 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 DTWD2Q8NBA8 298 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 KIFAP3Q92845 792 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 ZSCAN31Q96LW9 406 aaPredicted RBP14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 BHMT2Q9H2M3 363 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 LRWD1Q9UFC0 647 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 KIAA1024Q9UPX6 916 aa14.11□□□□□ -0.15
TM9SF1-211ENST00000531406 PRR23AA6NEV1 266 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 STK25O00506 426 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 ADAM12O43184 909 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 SRFP11831 508 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 FGFR3P22607 806 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 FSHRP23945 695 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 HTR4Q13639 388 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 PDIA5Q14554 519 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 LIN9Q5TKA1 542 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 ATF7IP2Q5U623 682 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 PDXDC1Q6P996 788 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 GET4Q7L5D6 327 aaPredicted RBP14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 GRASPQ7Z6J2 395 aaPredicted RBP14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 FAM184AQ8NB25 1140 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 PPP1R10Q96QC0 940 aaKnown RBP14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 CA14Q9ULX7 337 aa14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 NOL7Q9UMY1 257 aaKnown RBP14.1□□□□□ -0.15
TM9SF1-211ENST00000531406 K7ERI5 159 aa14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 C8AP07357 584 aa14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 IGFBP6P24592 240 aaPredicted RBP14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 U2AF2P26368 475 aaKnown RBP eCLIP14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 RAB33AQ14088 237 aa14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 DCLRE1AQ6PJP8 1040 aa14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 APBB1IPQ7Z5R6 666 aaPredicted RBP14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 IGSF22Q8N9C0 903 aa14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 GPR152Q8TDT2 470 aa14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 DDX19AQ9NUU7 478 aaKnown RBP14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 TNFSF13BQ9Y275 285 aa14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 ZFP37Q9Y6Q3 630 aaPredicted RBP14.09□□□□□ -0.15
TM9SF1-211ENST00000531406 TMEM189-UBE2V1I3L0A0 370 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 B3GAT3O94766 335 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 HOXA9P31269 272 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 OR1D2P34982 312 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 TOB1P50616 345 aaPredicted RBP14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 NTHL1P78549 312 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 PTGDRQ13258 359 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 ANGPT1Q15389 498 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 GLRA4Q5JXX5 417 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 PPM1LQ5SGD2 360 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 CD300LGQ6UXG3 332 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 RSPO2Q6UXX9 243 aaPredicted RBP14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 DAW1Q8N136 415 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 ST13P5Q8NFI4 369 aaPredicted RBP14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 SNX29Q8TEQ0 813 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 UROC1Q96N76 676 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 TBC1D17Q9HA65 648 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 SLC2A4RGQ9NR83 387 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 SH2B1Q9NRF2 756 aaPredicted RBP14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 MTRRQ9UBK8 725 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 CDH7Q9ULB5 785 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 DNM3Q9UQ16 869 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 NUMBLQ9Y6R0 609 aa14.08□□□□□ -0.16
TM9SF1-211ENST00000531406 SMIM28A0A1B0GU29 152 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 CCDC169A6NNP5 214 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 PP2D1A8MPX8 630 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 CCL16O15467 120 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 XYLBO75191 536 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 RFX1P22670 979 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 ANP32AP39687 249 aaKnown RBP14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 GRM5P41594 1212 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 NPTX2P47972 431 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 CLCNKBP51801 687 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 PEX3P56589 373 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 UPP1Q16831 310 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 AXDND1Q5T1B0 1012 aaPredicted RBP14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 PHLDB3Q6NSJ2 640 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 PARM1Q6UWI2 310 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 ITFG1Q8TB96 612 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 SLC7A14Q8TBB6 771 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 NKD2Q969F2 451 aaPredicted RBP14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 KIF2CQ99661 725 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 ACO2Q99798 780 aaKnown RBP14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 RPP25Q9BUL9 199 aaKnown RBP14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 RAB34Q9BZG1 259 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 CDT1Q9H211 546 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 GOLGA2P5Q9HBQ8 144 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 PTPRHQ9HD43 1115 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 ARHGEF3Q9NR81 526 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 POLIQ9UNA4 740 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 PCDHB6Q9Y5E3 794 aa14.07□□□□□ -0.16
TM9SF1-211ENST00000531406 BACE2Q9Y5Z0 518 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms