RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ZBED2Q9BTP6 218 aa18.41■□□□□ 0.54
SF3B2-211ENST00000531041 MKNK1Q9BUB5 465 aa18.41■□□□□ 0.54
SF3B2-211ENST00000531041 DNAJC25Q9H1X3 360 aa18.41■□□□□ 0.54
SF3B2-211ENST00000531041 KLK14Q9P0G3 267 aa18.41■□□□□ 0.54
SF3B2-211ENST00000531041 FRMD4BQ9Y2L6 1034 aa18.41■□□□□ 0.54
SF3B2-211ENST00000531041 INSL6Q9Y581 213 aa18.41■□□□□ 0.54
SF3B2-211ENST00000531041 RANBP2P49792 3224 aaKnown RBP18.41■□□□□ 0.54
SF3B2-211ENST00000531041 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 CASP4P49662 377 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 GATMP50440 423 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 ANO6Q4KMQ2 910 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 NOMO2Q5JPE7 1267 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 CEP135Q66GS9 1140 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 LRRC55Q6ZSA7 311 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 CSGALNACT2Q8N6G5 542 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 RDH13Q8NBN7 331 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 NOC3LQ8WTT2 800 aaKnown RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 ZFP42Q96MM3 310 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 CEP63Q96MT8 703 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 TSPAN18Q96SJ8 248 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 YME1L1Q96TA2 773 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 NAT10Q9H0A0 1025 aaKnown RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 ASB7Q9H672 318 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 RBAKQ9NYW8 714 aaPredicted RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 CNTN3Q9P232 1028 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 KANSL3Q9P2N6 904 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 PTGESO14684 152 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 TLL1O43897 1013 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 AKAP3O75969 853 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 IL18RAPO95256 599 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 KCNE1P15382 129 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 PSMC2P35998 433 aaKnown RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 AFF1P51825 1210 aaKnown RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 PPP2R3AQ06190 1150 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 FAM109BQ6ICB4 259 aaPredicted RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 CMTR2Q8IYT2 770 aaKnown RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 ENOX1Q8TC92 643 aaKnown RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 URGCPQ8TCY9 931 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 EEF2KMTQ96G04 330 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 MFSD14AQ96MC6 490 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 RPS6KC1Q96S38 1066 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 MRPL9Q9BYD2 267 aaKnown RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
SF3B2-211ENST00000531041 CXCL16Q9H2A7 254 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 MIOSQ9NXC5 875 aa18.4■□□□□ 0.54
SF3B2-211ENST00000531041 TBKBP1A7MCY6 615 aa18.39■□□□□ 0.53
SF3B2-211ENST00000531041 LACTBL1A8MY62 500 aa18.39■□□□□ 0.53
SF3B2-211ENST00000531041 FGFR1OPO95684 399 aaKnown RBP18.39■□□□□ 0.53
SF3B2-211ENST00000531041 CYP24A1Q07973 514 aa18.39■□□□□ 0.53
SF3B2-211ENST00000531041 SURF1Q15526 300 aa18.39■□□□□ 0.53
SF3B2-211ENST00000531041 FILIP1Q7Z7B0 1213 aa18.39■□□□□ 0.53
SF3B2-211ENST00000531041 SP7Q8TDD2 431 aaPredicted RBP18.39■□□□□ 0.53
SF3B2-211ENST00000531041 BPIFA3Q9BQP9 254 aa18.39■□□□□ 0.53
SF3B2-211ENST00000531041 SRRTQ9BXP5 876 aaKnown RBP18.39■□□□□ 0.53
SF3B2-211ENST00000531041 COLQQ9Y215 455 aaPredicted RBP18.39■□□□□ 0.53
SF3B2-211ENST00000531041 INPP5FQ9Y2H2 1132 aa18.39■□□□□ 0.53
SF3B2-211ENST00000531041 SMIM28A0A1B0GU29 152 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 GRXCR1A8MXD5 290 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 SLC16A3O15427 465 aaKnown RBP18.38■□□□□ 0.53
SF3B2-211ENST00000531041 THP07101 528 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 SCNN1GP51170 649 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 MCCD1P59942 119 aaPredicted RBP18.38■□□□□ 0.53
SF3B2-211ENST00000531041 GRIK3Q13003 919 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 PSMD6Q15008 389 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 SPATA1Q5VX52 437 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 FAM186BQ8IYM0 893 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 LRRC43Q8N309 656 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 FAM212AQ96EL1 285 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 BORCS6Q96GS4 357 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 ZMAT2Q96NC0 199 aaKnown RBP18.38■□□□□ 0.53
SF3B2-211ENST00000531041 PPP1R10Q96QC0 940 aaKnown RBP18.38■□□□□ 0.53
SF3B2-211ENST00000531041 TBC1D13Q9NVG8 400 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 PLAGL2Q9UPG8 496 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 DERAQ9Y315 318 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 PCDHA11Q9Y5I1 949 aa18.38■□□□□ 0.53
SF3B2-211ENST00000531041 CAVIN2O95810 425 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 POMCP01189 267 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
SF3B2-211ENST00000531041 RABGGTBP53611 331 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 WNT7BP56706 349 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 ZNF445P59923 1031 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 ENPEPQ07075 957 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 BTG3Q14201 252 aaPredicted RBP18.37■□□□□ 0.53
SF3B2-211ENST00000531041 ZBTB6Q15916 424 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 TPD52L1Q16890 204 aaPredicted RBP18.37■□□□□ 0.53
SF3B2-211ENST00000531041 PAN2Q504Q3 1202 aaKnown RBP18.37■□□□□ 0.53
SF3B2-211ENST00000531041 LRSAM1Q6UWE0 723 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 INTS8Q75QN2 995 aaKnown RBP18.37■□□□□ 0.53
SF3B2-211ENST00000531041 NT5DC4Q86YG4 428 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 PARD3BQ8TEW8 1205 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 PDE11AQ9HCR9 933 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 C2CD2Q9Y426 696 aa18.37■□□□□ 0.53
SF3B2-211ENST00000531041 GNA14O95837 355 aa18.36■□□□□ 0.53
SF3B2-211ENST00000531041 ZNF165P49910 485 aa18.36■□□□□ 0.53
SF3B2-211ENST00000531041 RNASELQ05823 741 aaKnown RBP18.36■□□□□ 0.53
SF3B2-211ENST00000531041 NAB2Q15742 525 aa18.36■□□□□ 0.53
SF3B2-211ENST00000531041 GLRA4Q5JXX5 417 aa18.36■□□□□ 0.53
SF3B2-211ENST00000531041 JADE1Q6IE81 842 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms