RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TTC38Q5R3I4 469 aa17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 EEF1DP3Q658K8 133 aa17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 ADSSL1Q8N142 457 aa17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 SLC7A14Q8TBB6 771 aa17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 TDRD15B5MCY1 1934 aaKnown RBP17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 CFAP54Q96N23 3096 aa17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 ACKR2O00590 384 aa17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 EIF5BO60841 1220 aaKnown RBP17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 RPA1P27694 616 aa17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 ST3GAL1Q11201 340 aa17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 ORC2Q13416 577 aaPredicted RBP17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 LILRA6Q6PI73 481 aa17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 FAM184AQ8NB25 1140 aa17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 CCDC113Q9H0I3 377 aa17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 BHMT2Q9H2M3 363 aa17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 NOL7Q9UMY1 257 aaKnown RBP17.42■□□□□ 0.38
CHMP4A-204ENST00000530996 B3GAT3O94766 335 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 DCNP07585 359 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 EFNA5P52803 228 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 YARSP54577 528 aaKnown RBP17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 ATF7IP2Q5U623 682 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 DCLRE1AQ6PJP8 1040 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 LNX1Q8TBB1 728 aaPredicted RBP17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 KIFAP3Q92845 792 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 HINFPQ9BQA5 517 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 CLSTN3Q9BQT9 956 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 CXCL16Q9H2A7 254 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 POLD4Q9HCU8 107 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 CDH7Q9ULB5 785 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 ZFP37Q9Y6Q3 630 aaPredicted RBP17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 MYO15AQ9UKN7 3530 aa17.41■□□□□ 0.38
CHMP4A-204ENST00000530996 MYO10Q9HD67 2058 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 ANHXE9PGG2 379 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 ADAM12O43184 909 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 EDN1P05305 212 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 NBR1Q14596 966 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 ZNF568Q3ZCX4 644 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 AXDND1Q5T1B0 1012 aaPredicted RBP17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 MTSS1LQ765P7 747 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 SNX29Q8TEQ0 813 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 FOXP1Q9H334 677 aaPredicted RBP17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 GOLGA2P5Q9HBQ8 144 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 LRWD1Q9UFC0 647 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 LIMCH1Q9UPQ0 1083 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 SIT1Q9Y3P8 196 aa17.4■□□□□ 0.38
CHMP4A-204ENST00000530996 CCDC169A6NNP5 214 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 PAPLNO95428 1278 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 HOXA9P31269 272 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 OR1D2P34982 312 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 OSTNP61366 133 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 PABPC1LQ4VXU2 614 aaKnown RBP17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 PARM1Q6UWI2 310 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 ING5Q8WYH8 240 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 FGF14Q92915 247 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 UROC1Q96N76 676 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 KXD1Q9BQD3 176 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 RAB34Q9BZG1 259 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 FOXQ1Q9C009 403 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 SLC2A4RGQ9NR83 387 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 TOPORSQ9NS56 1045 aaPredicted RBP17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 DDX19AQ9NUU7 478 aaKnown RBP17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 PPP4R2Q9NY27 417 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 KIAA1024Q9UPX6 916 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 CDY1Q9Y6F8 540 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 R4GN57 208 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 PHLPP2Q6ZVD8 1323 aa17.39■□□□□ 0.37
CHMP4A-204ENST00000530996 I3L4J1 428 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 TRAPPC3O43617 180 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 HARSP12081 509 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 MUTP22033 750 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 TKTP29401 623 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 RBM25P49756 843 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 CLCNKBP51801 687 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 HMGN5P82970 282 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 DMP1Q13316 513 aaPredicted RBP17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 NAB2Q15742 525 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 ZC3H14Q6PJT7 736 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 ITFG1Q8TB96 612 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 FGF13Q92913 245 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 SHDQ96IW2 340 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 HCFC1R1Q9NWW0 138 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 MTRRQ9UBK8 725 aa17.38■□□□□ 0.37
CHMP4A-204ENST00000530996 K7ERI5 159 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 FGFR3P22607 806 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 TRAPPC10P48553 1259 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 FXR2P51116 673 aaKnown RBP eCLIP17.37■□□□□ 0.372e-8■■□□□ 13.1
CHMP4A-204ENST00000530996 PEX3P56589 373 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 GPC5P78333 572 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 UBXN2BQ14CS0 331 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 NT5DC1Q5TFE4 455 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 PHLDB3Q6NSJ2 640 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 ANKS3Q6ZW76 656 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 PJA1Q8NG27 643 aa17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 PPP1R10Q96QC0 940 aaKnown RBP17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 RPP25Q9BUL9 199 aaKnown RBP17.37■□□□□ 0.37
CHMP4A-204ENST00000530996 TMEM189-UBE2V1I3L0A0 370 aa17.36■□□□□ 0.37
CHMP4A-204ENST00000530996 PRRG1O14668 218 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms