RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 PTCRAQ6ISU1 281 aaPredicted RBP16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 TMEM184AQ6ZMB5 413 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 ZNF720Q7Z2F6 126 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 MAP4K3Q8IVH8 894 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 RNF168Q8IYW5 571 aaPredicted RBP16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 VN1R2Q8NFZ6 395 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 AUTS2Q8WXX7 1259 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 MSLNLQ96KJ4 702 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 PPP1R10Q96QC0 940 aaKnown RBP16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 PAAF1Q9BRP4 392 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 LRRC27Q9C0I9 530 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 HAPLN2Q9GZV7 340 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 MRPL44Q9H9J2 332 aaKnown RBP16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 KBTBD4Q9NVX7 518 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 CLEC1BQ9P126 229 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 CACNG4Q9UBN1 327 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 ADAM28Q9UKQ2 775 aa16.34■□□□□ 0.21
PPFIA1-216ENST00000530746 SMIM28A0A1B0GU29 152 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 FRMD3A2A2Y4 597 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 GRXCR2A6NFK2 248 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 POLR2DO15514 142 aaKnown RBP16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 SRGAP2BP0DMP2 458 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 IDEP14735 1019 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 RBM10P98175 930 aaKnown RBP16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 AMPD3Q01432 767 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 PTPN14Q15678 1187 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 CLUL1Q15846 466 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 LEO1Q8WVC0 666 aaPredicted RBP16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 RABGGTAQ92696 567 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 STAMQ92783 540 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 HVCN1Q96D96 273 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 CHAMP1Q96JM3 812 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 SNX27Q96L92 541 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 SPATA32Q96LK8 384 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 UHRF1Q96T88 793 aaPredicted RBP16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 HERC2P3Q9BVR0 1158 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 OLFML3Q9NRN5 406 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 MRPL17Q9NRX2 175 aaKnown RBP16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 PANK4Q9NVE7 773 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 CD207Q9UJ71 328 aa16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 BARX2Q9UMQ3 279 aaPredicted RBP16.33■□□□□ 0.2
PPFIA1-216ENST00000530746 VWA8A3KMH1 1905 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 LILRB3O75022 631 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 CLASP2O75122 1294 aaKnown RBP16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 TADA2AO75478 443 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 PPP1R37O75864 691 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 URODP06132 367 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 IL9P15248 144 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 KCNE1P15382 129 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 ANK1P16157 1881 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 COASYQ13057 564 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 KYAT1Q16773 422 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 SEZ6Q53EL9 994 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 HERC4Q5GLZ8 1057 aaPredicted RBP16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 FUT10Q6P4F1 479 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 SLC39A4Q6P5W5 647 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 TMEM87AQ8NBN3 555 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 STRA6Q9BX79 667 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 GPR62Q9BZJ7 368 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 MAGEF1Q9HAY2 307 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 SLC38A7Q9NVC3 462 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 TBC1D7Q9P0N9 293 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 CNTN3Q9P232 1028 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 FAM50BQ9Y247 325 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 SSX2IPQ9Y2D8 614 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
PPFIA1-216ENST00000530746 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.26e-6■■■■■ 56.4
PPFIA1-216ENST00000530746 A0A0B4J269 797 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 MEFVO15553 781 aaPredicted RBP16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 MBTPS2O43462 519 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 KIF4AO95239 1232 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 CLTAP09496 248 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 GLUD2P49448 558 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 SMAD4Q13485 552 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 SLC10A6Q3KNW5 377 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 KIAA0319Q5VV43 1072 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 ADALQ6DHV7 355 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 LLGL2Q6P1M3 1020 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 CCDC65Q8IXS2 484 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 SMRP1Q8NCR6 262 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 UROC1Q96N76 676 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 ZMAT2Q96NC0 199 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 NECAB3Q96P71 396 aaPredicted RBP16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 EMILIN2Q9BXX0 1053 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 CHST7Q9NS84 486 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 KCNH3Q9ULD8 1083 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 MTCL1Q9Y4B5 1905 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 PLXNA3P51805 1871 aa16.31■□□□□ 0.2
PPFIA1-216ENST00000530746 TMEM189-UBE2V1I3L0A0 370 aa16.3■□□□□ 0.2
PPFIA1-216ENST00000530746 C2CD2LO14523 706 aa16.3■□□□□ 0.2
PPFIA1-216ENST00000530746 OGTO15294 1046 aa16.3■□□□□ 0.2
PPFIA1-216ENST00000530746 FAM189A1O60320 539 aa16.3■□□□□ 0.2
PPFIA1-216ENST00000530746 GCNT3O95395 438 aa16.3■□□□□ 0.2
PPFIA1-216ENST00000530746 CNPP09543 421 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-216ENST00000530746 CMA1P23946 247 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms