RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CHMP6Q96FZ7 201 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-206ENST00000530277 POLR3CQ9BUI4 534 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-206ENST00000530277 EPN3Q9H201 632 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCN3B-206ENST00000530277 FBXO40Q9UH90 709 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 ODF2LQ9ULJ1 636 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 GAKO14976 1311 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 MYH10P35580 1976 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 MEFVO15553 781 aaPredicted RBP13.15□□□□□ -0.3
SCN3B-206ENST00000530277 ATP9AO75110 1047 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 FLT3P36888 993 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 RARRES1P49788 294 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 NEDD9Q14511 834 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 P3H1Q32P28 736 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 SV2AQ7L0J3 742 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 MED10Q9BTT4 135 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 ARHGAP42A6NI28 874 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 PGK2P07205 417 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 ADCY2Q08462 1091 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 NFX1Q12986 1120 aaKnown RBP13.15□□□□□ -0.3
SCN3B-206ENST00000530277 ZNF667Q5HYK9 610 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 FAXCQ5TGI0 409 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 PHLDB3Q6NSJ2 640 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 ZSWIM2Q8NEG5 633 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 OR6B3Q8NGW1 331 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 GGA3Q9NZ52 723 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 TBX20Q9UMR3 447 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 PYGMP11217 842 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 CIITAP33076 1130 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 MSH2P43246 934 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 IFI35P80217 286 aaPredicted RBP13.14□□□□□ -0.31
SCN3B-206ENST00000530277 NCOA4Q13772 614 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 RBBP8NLQ8NC74 664 aaPredicted RBP13.14□□□□□ -0.31
SCN3B-206ENST00000530277 SLC5A5Q92911 643 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 ATXN7L3BQ96GX2 97 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 TSNARE1Q96NA8 513 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 SLC13A1Q9BZW2 595 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 MRPL42Q9Y6G3 142 aaKnown RBP13.14□□□□□ -0.31
SCN3B-206ENST00000530277 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 TXNDC9O14530 226 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 CSPG5O95196 566 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 HSPA6P17066 643 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 ITGA8P53708 1063 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 EIF3BP55884 814 aaKnown RBP13.14□□□□□ -0.31
SCN3B-206ENST00000530277 KIRREL3Q8IZU9 778 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 TMEM35BQ8NCS4 154 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 MYCBPAPQ8TBZ2 947 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 ATP8B4Q8TF62 1192 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 MAML1Q92585 1016 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 TGS1Q96RS0 853 aaKnown RBP13.14□□□□□ -0.31
SCN3B-206ENST00000530277 ELP3Q9H9T3 547 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 RPF1Q9H9Y2 349 aaKnown RBP13.14□□□□□ -0.31
SCN3B-206ENST00000530277 FNDC3AQ9Y2H6 1198 aaKnown RBP13.14□□□□□ -0.31
SCN3B-206ENST00000530277 ASTN1O14525 1302 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 ITGB5P18084 799 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 STAT5BP51692 787 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 PTGISQ16647 500 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 CCDC62Q6P9F0 684 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 RBM15Q96T37 977 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCN3B-206ENST00000530277 ACAD9Q9H845 621 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 AIPL1Q9NZN9 384 aa13.14□□□□□ -0.31
SCN3B-206ENST00000530277 M0QYV0 167 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 MCF2LO15068 1137 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 NOL4O94818 638 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 CYP11B1P15538 503 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 GTF2H1P32780 548 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 GEN1Q17RS7 908 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 FAM102AQ5T9C2 384 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 C1orf131Q8NDD1 294 aaKnown RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SYTL5Q8TDW5 730 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 PSPC1Q8WXF1 523 aaKnown RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 EFCC1Q9HA90 598 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 KCNMB3Q9NPA1 279 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SUCLA2Q9P2R7 463 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 NR2E1Q9Y466 385 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 UBE4BO95155 1302 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 MT-ND3P03897 115 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 NOP14P78316 857 aaKnown RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 SEMA3FQ13275 785 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 AMHR2Q16671 573 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 EMC1Q8N766 993 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 PPM1NQ8N819 430 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 AGR3Q8TD06 166 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 AENQ8WTP8 325 aaKnown RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 DDX23Q9BUQ8 820 aaKnown RBP13.13□□□□□ -0.31
SCN3B-206ENST00000530277 FIS1Q9Y3D6 152 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 TMEM120BA0PK00 339 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 H0YCG3 227 aa13.13□□□□□ -0.31
SCN3B-206ENST00000530277 I3L4J1 428 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms