RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 CORO7P57737 925 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 SPIRE1Q08AE8 756 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 GPR19Q15760 415 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 PKN1Q16512 942 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 NFE2Q16621 373 aaPredicted RBP8.34□□□□□ -1.07
SVIP-204ENST00000530199 SYDE2Q5VT97 1194 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 IQSEC1Q6DN90 963 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 HHIPL2Q6UWX4 724 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 ANKRD33Q7Z3H0 272 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 GPRC5AQ8NFJ5 357 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 BCL7CQ8WUZ0 217 aaPredicted RBP8.34□□□□□ -1.07
SVIP-204ENST00000530199 SMAD5Q99717 465 aaKnown RBP8.34□□□□□ -1.07
SVIP-204ENST00000530199 MTA3Q9BTC8 594 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 BOCQ9BWV1 1114 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 EPB41L1Q9H4G0 881 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 SMURF1Q9HCE7 757 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 OXSMQ9NWU1 459 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 FLRT1Q9NZU1 646 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 SLAMF8Q9P0V8 285 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 FAN1Q9Y2M0 1017 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 A0A1B0GUL6 1792 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 CHD6Q8TD26 2715 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 GABRDO14764 452 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 MSTNO14793 375 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 CTNND1O60716 968 aaKnown RBP8.33□□□□□ -1.08
SVIP-204ENST00000530199 FUCA1P04066 466 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 COL6A2P12110 1019 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 CYBAP13498 195 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 KRT15P19012 456 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 NEK2P51955 445 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 ZP2Q05996 745 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 KCTD2Q14681 263 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 RALGPS1Q5JS13 557 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 ARHGAP36Q6ZRI8 547 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 OTOP3Q7RTS5 596 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 PLEKHH3Q7Z736 793 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 TRPV1Q8NER1 839 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 TBC1D22AQ8WUA7 517 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 EDC3Q96F86 508 aaKnown RBP8.33□□□□□ -1.08
SVIP-204ENST00000530199 ASIC4Q96FT7 647 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 ALPK1Q96QP1 1244 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 PLEKHF1Q96S99 279 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 PLA2G12BQ9BX93 195 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 MTIF3Q9H2K0 278 aaKnown RBP8.33□□□□□ -1.08
SVIP-204ENST00000530199 H2AFY2Q9P0M6 372 aaPredicted RBP8.33□□□□□ -1.08
SVIP-204ENST00000530199 COA3Q9Y2R0 106 aaPredicted RBP8.33□□□□□ -1.08
SVIP-204ENST00000530199 RWDD3Q9Y3V2 267 aa8.33□□□□□ -1.08
SVIP-204ENST00000530199 DOCK1Q14185 1865 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 GBF1Q92538 1859 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 TPRP12270 2363 aaKnown RBP8.32□□□□□ -1.08
SVIP-204ENST00000530199 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.32□□□□□ -1.08
SVIP-204ENST00000530199 TCRBV5S4A2TA0A5A2 114 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 SLC12A8A0AV02 714 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 K7ESF4 209 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 NKRFO15226 690 aaKnown RBP eCLIP8.32□□□□□ -1.08
SVIP-204ENST00000530199 ULK1O75385 1050 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 DGKIO75912 1065 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 CSF1RP07333 972 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 CD8BP10966 210 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 HOXA7P31268 230 aaPredicted RBP8.32□□□□□ -1.08
SVIP-204ENST00000530199 GRIK1P39086 918 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 LRRC41Q15345 812 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 LEXMQ3ZCV2 418 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 HSF5Q4G112 596 aaPredicted RBP8.32□□□□□ -1.08
SVIP-204ENST00000530199 EPHA10Q5JZY3 1008 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 CEP128Q6ZU80 1094 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 ZNF365Q70YC5 407 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 SPRED2Q7Z698 418 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 RIOX2Q8IUF8 465 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 LZTR1Q8N653 840 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 EFHBQ8N7U6 833 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 FERMT2Q96AC1 680 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 YIPF4Q9BSR8 244 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 MENTQ9BUN1 341 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 PORCNQ9H237 461 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 TXNRD2Q9NNW7 524 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 ALG13Q9NP73 1137 aaKnown RBP8.32□□□□□ -1.08
SVIP-204ENST00000530199 TMEM59LQ9UK28 342 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 TBX21Q9UL17 535 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 SLC5A6Q9Y289 635 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 RIF1Q5UIP0 2472 aaKnown RBP8.32□□□□□ -1.08
SVIP-204ENST00000530199 BRWD1Q9NSI6 2320 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 FAM186AA6NE01 2351 aa8.32□□□□□ -1.08
SVIP-204ENST00000530199 MAST3O60307 1309 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.31□□□□□ -1.08
SVIP-204ENST00000530199 MED19A0JLT2 244 aaPredicted RBP8.31□□□□□ -1.08
SVIP-204ENST00000530199 SEPT4O43236 478 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 PQBP1O60828 265 aaKnown RBP8.31□□□□□ -1.08
SVIP-204ENST00000530199 HIBADHP31937 336 aaKnown RBP8.31□□□□□ -1.08
SVIP-204ENST00000530199 TCP10Q12799 353 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 FAPQ12884 760 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 KRT24Q2M2I5 525 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 MROH9Q5TGP6 573 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 PTRH1Q86Y79 214 aaKnown RBP8.31□□□□□ -1.08
SVIP-204ENST00000530199 WFDC3Q8IUB2 231 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 ANKS4BQ8N8V4 417 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 SCYL1Q96KG9 808 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 IMPACTQ9P2X3 320 aa8.31□□□□□ -1.08
SVIP-204ENST00000530199 RBPJLQ9UBG7 517 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms