RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 PFKPQ01813 784 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 LMNB2Q03252 620 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 GRIK3Q13003 919 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 CAPSQ13938 189 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 NPY5RQ15761 445 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 OTUD6AQ7L8S5 288 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 TPH2Q8IWU9 490 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 C4orf19Q8IY42 314 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 HACE1Q8IYU2 909 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 LNX1Q8TBB1 728 aaPredicted RBP12.56□□□□□ -0.4
SF3B2-208ENST00000529994 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 PLA2G2FQ9BZM2 168 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 KCNMB3Q9NPA1 279 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 HEBP1Q9NRV9 189 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 ORC3Q9UBD5 711 aaPredicted RBP12.56□□□□□ -0.4
SF3B2-208ENST00000529994 PPME1Q9Y570 386 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 F5P12259 2224 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 ZFHX4Q86UP3 3567 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 PRR5-ARHGAP8B1AHC4 643 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 MARCH6O60337 910 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 LILRB5O75023 590 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 CTDNEP1O95476 244 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 XBP1P17861 261 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 ARHGAP8P85298 464 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 MTAPQ13126 283 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 TFDP1Q14186 410 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 MXD4Q14582 209 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-208ENST00000529994 EPHA7Q15375 998 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 ME3Q16798 604 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 ST3GAL2Q16842 350 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 PABPC1LQ4VXU2 614 aaKnown RBP12.55□□□□□ -0.4
SF3B2-208ENST00000529994 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-208ENST00000529994 SLC27A1Q6PCB7 646 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 GPR65Q8IYL9 337 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 HAS1Q92839 578 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 CLDN23Q96B33 292 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 MCRS1Q96EZ8 462 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 RTKNQ9BST9 563 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 CXCL16Q9H2A7 254 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 DNMT3BQ9UBC3 853 aaKnown RBP12.55□□□□□ -0.4
SF3B2-208ENST00000529994 GMEB2Q9UKD1 530 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 CFAP47Q6ZTR5 3102 aa12.55□□□□□ -0.4
SF3B2-208ENST00000529994 TRIP11Q15643 1979 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 CCDC194A0A1B0GVG4 234 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 NCAM2O15394 837 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 CCNT1O60563 726 aaKnown RBP12.54□□□□□ -0.4
SF3B2-208ENST00000529994 OR1D2P34982 312 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 MAGEA9P43362 315 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 SPEM2Q0P670 501 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 TUSC3Q13454 348 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 PCBP1Q15365 356 aaKnown RBP eCLIP12.54□□□□□ -0.4
SF3B2-208ENST00000529994 RSPO2Q6UXX9 243 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-208ENST00000529994 ZNF852Q6ZMS4 543 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 NELL1Q92832 810 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 GTF3C6Q969F1 213 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 BORCS6Q96GS4 357 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 FAM20AQ96MK3 541 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 ZSWIM4Q9H7M6 989 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 PRMT8Q9NR22 394 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-208ENST00000529994 NDRG2Q9UN36 371 aaKnown RBP12.54□□□□□ -0.4
SF3B2-208ENST00000529994 MRPS23Q9Y3D9 190 aaKnown RBP12.54□□□□□ -0.4
SF3B2-208ENST00000529994 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.54□□□□□ -0.4
SF3B2-208ENST00000529994 STK36Q9NRP7 1315 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 USP24Q9UPU5 2620 aa12.54□□□□□ -0.4
SF3B2-208ENST00000529994 A0A087WWV3 80 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 A0A1B0GUA9 196 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 SHISA7A6NL88 538 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 TBC1D4O60343 1298 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 JAK2O60674 1132 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 ADRB1P08588 477 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 KCNA4P22459 653 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 GLRA2P23416 452 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 IGFBP6P24592 240 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-208ENST00000529994 HOXA9P31269 272 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 ARL2P36404 184 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 FZD5Q13467 585 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 GRM2Q14416 872 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 SLC5A9Q2M3M2 681 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 TANGO2Q6ICL3 276 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 POTEHQ6S545 545 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 PIK3AP1Q6ZUJ8 805 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 NEK8Q86SG6 692 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-208ENST00000529994 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 NELL2Q99435 816 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
SF3B2-208ENST00000529994 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.4
SF3B2-208ENST00000529994 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 PTGESO14684 152 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 SLITRK3O94933 977 aa12.52□□□□□ -0.41
SF3B2-208ENST00000529994 CEBPBP17676 345 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms