RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PPP1R16BQ96T49 567 aa6.35□□□□□ -1.39
AMBRA1-209ENST00000529963 TTC1Q99614 292 aa6.35□□□□□ -1.39
AMBRA1-209ENST00000529963 C11orf84Q9BUA3 381 aaPredicted RBP6.35□□□□□ -1.39
AMBRA1-209ENST00000529963 TMX1Q9H3N1 280 aa6.35□□□□□ -1.39
AMBRA1-209ENST00000529963 ARHGAP28Q9P2N2 729 aa6.35□□□□□ -1.39
AMBRA1-209ENST00000529963 PMF1-BGLAPU3KQ54 211 aa6.35□□□□□ -1.39
AMBRA1-209ENST00000529963 SCN9AQ15858 1988 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 PI4KAP2A4QPH2 592 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 EYA4O95677 639 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 TSPAN15O95858 294 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 BPIP17213 487 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 NF2P35240 595 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 IGHMBP2P38935 993 aaKnown RBP6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 RAP1GAPP47736 663 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 MMP14P50281 582 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 LINC00310P59036 64 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 KCNA10Q16322 511 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 SKIDA1Q1XH10 827 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 PRAMEF18Q5VWM3 479 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 ESRP1Q6NXG1 681 aaKnown RBP6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 CC2D1AQ6P1N0 951 aaPredicted RBP6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 PI4KAP1Q8N8J0 262 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 COA1Q9GZY4 146 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 GREM2Q9H772 168 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 IFT22Q9H7X7 185 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 EMC7Q9NPA0 242 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 PCDH12Q9NPG4 1184 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 BTBD7Q9P203 1132 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 CROTQ9UKG9 612 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 SPO11Q9Y5K1 396 aa6.34□□□□□ -1.39
AMBRA1-209ENST00000529963 POLR2AP24928 1970 aaKnown RBP6.34□□□□□ -1.4
AMBRA1-209ENST00000529963 PAPPA2Q9BXP8 1791 aa6.34□□□□□ -1.4
AMBRA1-209ENST00000529963 KIAA0100Q14667 2235 aaKnown RBP6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 ZNF839A8K0R7 811 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 IGKV5-2P06315 115 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 C8AP07357 584 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 ENO2P09104 434 aaPredicted RBP6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 AOAHP28039 575 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 CDKN1CP49918 316 aaPredicted RBP6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 CCT4P50991 539 aaKnown RBP6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 TMPRSS15P98073 1019 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 STAT4Q14765 748 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 PKN1Q16512 942 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 ATP13A4Q4VNC1 1196 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 STRIP1Q5VSL9 837 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 FBXO46Q6PJ61 603 aaPredicted RBP6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 LRSAM1Q6UWE0 723 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 UBE3BQ7Z3V4 1068 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 TSPYL6Q8N831 410 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 FNIP1Q8TF40 1166 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 ANKRD2Q9GZV1 360 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 NGRNQ9NPE2 291 aaKnown RBP6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 ATP8A1Q9Y2Q0 1164 aa6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 NOP58Q9Y2X3 529 aaKnown RBP6.33□□□□□ -1.4
AMBRA1-209ENST00000529963 A0A1B0GTL3 188 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 UBE2Q2LH0YL09 131 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 WNT10BO00744 389 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 SDHAP31040 664 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 KCNJ4P48050 445 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 LSSP48449 732 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 ANAPC15P60006 121 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 DACT2Q5SW24 774 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 ARMC9Q7Z3E5 817 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 APOBEC3FQ8IUX4 373 aaKnown RBP6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 DTX3Q8N9I9 347 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 TSR2Q969E8 191 aaKnown RBP6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 MPHOSPH8Q99549 860 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 TACO1Q9BSH4 297 aaKnown RBP6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 PLA2G12BQ9BX93 195 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 IRF2BPLQ9H1B7 796 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 MYH16Q9H6N6 1097 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 HSPBP1Q9NZL4 362 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 ZFP69BQ9UJL9 534 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 PSME4Q14997 1843 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 ZNF804BA4D1E1 1349 aa6.32□□□□□ -1.4
AMBRA1-209ENST00000529963 MPIG6BO95866 241 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 IL18BPO95998 194 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 PTGS1P23219 599 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 HERVK_113P62684 666 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 SMAD3P84022 425 aaKnown RBP6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 SREBF2Q12772 1141 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 SMAD2Q15796 467 aaKnown RBP6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 TWISTNBQ3B726 338 aaPredicted RBP6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 TTLL5Q6EMB2 1281 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 MOB2Q70IA6 237 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 C11orf74Q86VG3 221 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 CILP2Q8IUL8 1156 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 EFHBQ8N7U6 833 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 STPG3Q8N7X2 389 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 LINC00482Q8N8I6 264 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 KYQ8NBH2 561 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 WDR66Q8TBY9 1149 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 COG1Q8WTW3 980 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 FOXRED1Q96CU9 486 aaPredicted RBP6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 MXD3Q9BW11 206 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 ZMAT4Q9H898 229 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 ACSS2Q9NR19 701 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 SPATA6Q9NWH7 488 aaPredicted RBP6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 ARHGAP20Q9P2F6 1191 aa6.31□□□□□ -1.4
AMBRA1-209ENST00000529963 SCAF8Q9UPN6 1271 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms