RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 DDX25Q9UHL0 483 aaKnown RBP9.5□□□□□ -0.89
TGFBR3-208ENST00000529608 KCNJ14Q9UNX9 436 aa9.5□□□□□ -0.89
TGFBR3-208ENST00000529608 NUMBLQ9Y6R0 609 aa9.5□□□□□ -0.89
TGFBR3-208ENST00000529608 CNTNAP2Q9UHC6 1331 aa9.5□□□□□ -0.89
TGFBR3-208ENST00000529608 ANHXE9PGG2 379 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 B4GALT5O43286 388 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 ZMYND10O75800 440 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 MBD3O95983 291 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 ADH1AP07327 375 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 ITGA4P13612 1032 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 PDCP20941 246 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 IGFBP6P24592 240 aaPredicted RBP9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 QARSP47897 775 aaKnown RBP9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 AKAP17AQ02040 695 aaKnown RBP9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 SPIRE1Q08AE8 756 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 PKP1Q13835 747 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 EMC2Q15006 297 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 EARS2Q5JPH6 523 aaKnown RBP9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 RTP2Q5QGT7 225 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 MOXD1Q6UVY6 613 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 PRSS55Q6UWB4 352 aaPredicted RBP9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 PARM1Q6UWI2 310 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 SUMF1Q8NBK3 374 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 RNF149Q8NC42 400 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 DAGLBQ8NCG7 672 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 KCNG4Q8TDN1 519 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 DYDC2Q96IM9 177 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 APOL6Q9BWW8 343 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 NXF3Q9H4D5 531 aaKnown RBP9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 ARHGEF3Q9NR81 526 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 KANSL3Q9P2N6 904 aa9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 MTF2Q9Y483 593 aaPredicted RBP9.49□□□□□ -0.89
TGFBR3-208ENST00000529608 A0A087WWV3 80 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 CARNS1A5YM72 827 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 ADAM12O43184 909 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 STX6O43752 255 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 GAS2O43903 313 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 PRPF40AO75400 957 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 P4HBP07237 508 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 ZSCAN22P10073 491 aaPredicted RBP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 AKAP5P24588 427 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 YWHABP31946 246 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 PTENP60484 403 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 GPC5P78333 572 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 CYP4A11Q02928 519 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 MBTD1Q05BQ5 628 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 CTTNQ14247 550 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 NONOQ15233 471 aaKnown RBP eCLIP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 PHLDB3Q6NSJ2 640 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 FUT10Q6P4F1 479 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 CCDC83Q8IWF9 413 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 C4orf19Q8IY42 314 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 ASAP3Q8TDY4 903 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 PSPC1Q8WXF1 523 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 SLC7A3Q8WY07 619 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 MTRQ99707 1265 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 LXNQ9BS40 222 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 PRKD2Q9BZL6 878 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 GZF1Q9H116 711 aaPredicted RBP9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 KLK14Q9P0G3 267 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 SIT1Q9Y3P8 196 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 CACNA1IQ9P0X4 2223 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 COL4A2P08572 1712 aa9.48□□□□□ -0.89
TGFBR3-208ENST00000529608 SLITRK3O94933 977 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 DEXIO95424 95 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 ARF4P18085 180 aaPredicted RBP9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 SYT1P21579 422 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 GJB2P29033 226 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 RFC5P40937 340 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 STARD6P59095 220 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 SSRP1Q08945 709 aaKnown RBP9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 STK3Q13188 491 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 CAPSQ13938 189 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 EPHA7Q15375 998 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 ME3Q16798 604 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 XKR9Q5GH70 373 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 DCLRE1AQ6PJP8 1040 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 CYP26C1Q6V0L0 522 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 GRASPQ7Z6J2 395 aaPredicted RBP9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 C1orf210Q8IVY1 113 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 PJA1Q8NG27 643 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 HASPINQ8TF76 798 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 HDAC7Q8WUI4 952 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 STAMQ92783 540 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 CLSTN3Q9BQT9 956 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 JPH2Q9BR39 696 aaPredicted RBP9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 CSRNP2Q9H175 543 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 PIDD1Q9HB75 910 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 SLC2A4RGQ9NR83 387 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 DLL3Q9NYJ7 618 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 STK39Q9UEW8 545 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 TPCN1Q9ULQ1 816 aa9.47□□□□□ -0.89
TGFBR3-208ENST00000529608 SHISA7A6NL88 538 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 INO80B-WBP1J3KQ70 363 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 WNT7AO00755 349 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 ERLIN2O94905 339 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 NPTXRO95502 500 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 EDN1P05305 212 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 CD72P21854 359 aa9.46□□□□□ -0.9
TGFBR3-208ENST00000529608 GLRA2P23416 452 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms