RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FGF13Q92913 245 aa10□□□□□ -0.81
VPS11-203ENST00000529545 CPB2Q96IY4 423 aa10□□□□□ -0.81
VPS11-203ENST00000529545 FAM20AQ96MK3 541 aa10□□□□□ -0.81
VPS11-203ENST00000529545 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
VPS11-203ENST00000529545 MBOAT7Q96N66 472 aa10□□□□□ -0.81
VPS11-203ENST00000529545 MTRQ99707 1265 aa10□□□□□ -0.81
VPS11-203ENST00000529545 RTKNQ9BST9 563 aa10□□□□□ -0.81
VPS11-203ENST00000529545 PHF20Q9BVI0 1012 aa10□□□□□ -0.81
VPS11-203ENST00000529545 EIF2AQ9BY44 585 aaKnown RBP10□□□□□ -0.81
VPS11-203ENST00000529545 LTB4R2Q9NPC1 389 aa10□□□□□ -0.81
VPS11-203ENST00000529545 MIOSQ9NXC5 875 aa10□□□□□ -0.81
VPS11-203ENST00000529545 PARP2Q9UGN5 583 aa10□□□□□ -0.81
VPS11-203ENST00000529545 RAB23Q9ULC3 237 aa10□□□□□ -0.81
VPS11-203ENST00000529545 SMG5Q9UPR3 1016 aaKnown RBP10□□□□□ -0.81
VPS11-203ENST00000529545 HES2Q9Y543 173 aa10□□□□□ -0.81
VPS11-203ENST00000529545 PATJQ8NI35 1801 aa10□□□□□ -0.81
VPS11-203ENST00000529545 NID2Q14112 1375 aa10□□□□□ -0.81
VPS11-203ENST00000529545 F8W810 466 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 EML1O00423 815 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 C8AP07357 584 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 HOXA9P31269 272 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 YWHABP31946 246 aaKnown RBP9.99□□□□□ -0.81
VPS11-203ENST00000529545 PTENP60484 403 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 SSRP1Q08945 709 aaKnown RBP9.99□□□□□ -0.81
VPS11-203ENST00000529545 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
VPS11-203ENST00000529545 PPP2R5DQ14738 602 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 PSMD5Q16401 504 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 PROX2Q3B8N5 592 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 PRSS55Q6UWB4 352 aaPredicted RBP9.99□□□□□ -0.81
VPS11-203ENST00000529545 KRT25Q7Z3Z0 450 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 LAPTM4BQ86VI4 370 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 CEP57Q86XR8 500 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 C4orf19Q8IY42 314 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 ZBTB44Q8NCP5 570 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
VPS11-203ENST00000529545 CCDC43Q96MW1 224 aaKnown RBP9.99□□□□□ -0.81
VPS11-203ENST00000529545 LXNQ9BS40 222 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 TTPALQ9BTX7 342 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 FAM126AQ9BYI3 521 aaPredicted RBP9.99□□□□□ -0.81
VPS11-203ENST00000529545 EPC1Q9H2F5 836 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 FBXW11Q9UKB1 542 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 MTF2Q9Y483 593 aaPredicted RBP9.99□□□□□ -0.81
VPS11-203ENST00000529545 ZMYM2Q9UBW7 1377 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 FRYLO94915 3013 aa9.99□□□□□ -0.81
VPS11-203ENST00000529545 DCDC2BA2VCK2 349 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 CPLX1O14810 134 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 CCL16O15467 120 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 DEXIO95424 95 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 CPA1P15085 419 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 CD72P21854 359 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 AKAP5P24588 427 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 PSMA5P28066 241 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 RPS9P46781 194 aaKnown RBP9.98□□□□□ -0.81
VPS11-203ENST00000529545 NRLP54845 237 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
VPS11-203ENST00000529545 NTHL1P78549 312 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 POU5F1BQ06416 359 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 ELAVL2Q12926 359 aaKnown RBP9.98□□□□□ -0.81
VPS11-203ENST00000529545 TUSC3Q13454 348 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 EPHA7Q15375 998 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 INF2Q27J81 1249 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 UVSSAQ2YD98 709 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 BMP2KLQ5H9B9 411 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 RTP2Q5QGT7 225 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 FAM171A1Q5VUB5 890 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 SLC27A1Q6PCB7 646 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 ZNF852Q6ZMS4 543 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 TPRG1Q6ZUI0 275 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 RTL10Q7L3V2 364 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 FAM177A1Q8N128 213 aaPredicted RBP9.98□□□□□ -0.81
VPS11-203ENST00000529545 PIK3R5Q8WYR1 880 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 RABGGTAQ92696 567 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 CHAMP1Q96JM3 812 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 NAP1L4Q99733 375 aaKnown RBP9.98□□□□□ -0.81
VPS11-203ENST00000529545 KXD1Q9BQD3 176 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 NXF3Q9H4D5 531 aaKnown RBP9.98□□□□□ -0.81
VPS11-203ENST00000529545 ZSWIM4Q9H7M6 989 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 KLK14Q9P0G3 267 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 VAV3Q9UKW4 847 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 KCNH3Q9ULD8 1083 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 EPG5Q9HCE0 2579 aa9.98□□□□□ -0.81
VPS11-203ENST00000529545 CCDC194A0A1B0GVG4 234 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 SLC37A4O43826 429 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 LILRB5O75023 590 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 BAG4O95429 457 aaKnown RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 NPTXRO95502 500 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 POU2F2P09086 479 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 GCFC2P16383 781 aaKnown RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 ARF4P18085 180 aaPredicted RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 RPS6KB1P23443 525 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 MBTD1Q05BQ5 628 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 ADCY1Q08828 1119 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 ST3GAL2Q16842 350 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 PABPC1LQ4VXU2 614 aaKnown RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 AXDND1Q5T1B0 1012 aaPredicted RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 NCAPH2Q6IBW4 605 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 PPP4R3AQ6IN85 833 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 CPLX2Q6PUV4 134 aaKnown RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 NEK8Q86SG6 692 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 TPH2Q8IWU9 490 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms