RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 OTOP3Q7RTS5 596 aa12.72□□□□□ -0.37
SRPRA-203ENST00000528744 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
SRPRA-203ENST00000528744 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
SRPRA-203ENST00000528744 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
SRPRA-203ENST00000528744 SMG7Q92540 1137 aaKnown RBP12.72□□□□□ -0.37
SRPRA-203ENST00000528744 PPP1R10Q96QC0 940 aaKnown RBP12.72□□□□□ -0.37
SRPRA-203ENST00000528744 ACO2Q99798 780 aaKnown RBP12.72□□□□□ -0.37
SRPRA-203ENST00000528744 TARS2Q9BW92 718 aaKnown RBP12.72□□□□□ -0.37
SRPRA-203ENST00000528744 PRKD2Q9BZL6 878 aa12.72□□□□□ -0.37
SRPRA-203ENST00000528744 CDT1Q9H211 546 aa12.72□□□□□ -0.37
SRPRA-203ENST00000528744 STK39Q9UEW8 545 aa12.72□□□□□ -0.37
SRPRA-203ENST00000528744 NPHP3-ACAD11A0A0J9YXS1 232 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 K7ERI5 159 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 EIF5BO60841 1220 aaKnown RBP12.71□□□□□ -0.37
SRPRA-203ENST00000528744 NR1I2O75469 434 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 ZMYND10O75800 440 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 BRCC3P46736 316 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 PTPN5P54829 565 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 OSTNP61366 133 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 RAD51AP2Q09MP3 1159 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 TDGQ13569 410 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.37
SRPRA-203ENST00000528744 SEZ6Q53EL9 994 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 XKR4Q5GH76 650 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 HAUS3Q68CZ6 603 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 SLC44A3Q8N4M1 653 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 HDAC7Q8WUI4 952 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 PIK3R5Q8WYR1 880 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 KIFAP3Q92845 792 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 ACSF2Q96CM8 615 aaPredicted RBP12.71□□□□□ -0.37
SRPRA-203ENST00000528744 TTPALQ9BTX7 342 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 RHOBTB2Q9BYZ6 727 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 HAPLN2Q9GZV7 340 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 ARHGAP28Q9P2N2 729 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 NOL7Q9UMY1 257 aaKnown RBP12.71□□□□□ -0.37
SRPRA-203ENST00000528744 DNM3Q9UQ16 869 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 TNFSF13BQ9Y275 285 aa12.71□□□□□ -0.37
SRPRA-203ENST00000528744 ZMYM2Q9UBW7 1377 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 CLUHO75153 1309 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 KRBA1A5PL33 1030 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 NRG2O14511 850 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-203ENST00000528744 SLC16A4O15374 487 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 FGFR3P22607 806 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 PROZP22891 400 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 GJB2P29033 226 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 GBP2P32456 591 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-203ENST00000528744 ATP2C1P98194 919 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-203ENST00000528744 GRIN1Q05586 938 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 UPP1Q16831 310 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 ARSHQ5FYA8 562 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 DTHD1Q6ZMT9 781 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 GRASPQ7Z6J2 395 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-203ENST00000528744 IFT74Q96LB3 600 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 NTPCRQ9BSD7 190 aaKnown RBP12.7□□□□□ -0.38
SRPRA-203ENST00000528744 PLEKHA4Q9H4M7 779 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.7□□□□□ -0.38
SRPRA-203ENST00000528744 EPS15L1Q9UBC2 864 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 FBXW11Q9UKB1 542 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 DUSP12Q9UNI6 340 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 DOCK6Q96HP0 2047 aa12.7□□□□□ -0.38
SRPRA-203ENST00000528744 SF3B1O75533 1304 aaKnown RBP eCLIP12.69□□□□□ -0.38
SRPRA-203ENST00000528744 GALR2O43603 387 aaPredicted RBP12.69□□□□□ -0.38
SRPRA-203ENST00000528744 B3GAT3O94766 335 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 C1RP00736 705 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 LAMP2P13473 410 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 TKTP29401 623 aaKnown RBP12.69□□□□□ -0.38
SRPRA-203ENST00000528744 OR1D2P34982 312 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 PRPHP41219 470 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 GRM5P41594 1212 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 EFNA5P52803 228 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 SLC12A3P55017 1021 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 PPP2R5AQ15172 486 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 RABEP1Q15276 862 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 ZRSR1Q15695 479 aaKnown RBP12.69□□□□□ -0.38
SRPRA-203ENST00000528744 PSMD5Q16401 504 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 DCAF4L1Q3SXM0 396 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 HYIQ5T013 277 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 MCTP1Q6DN14 999 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 ASTLQ6HA08 431 aaPredicted RBP12.69□□□□□ -0.38
SRPRA-203ENST00000528744 DCLRE1AQ6PJP8 1040 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 FLCNQ8NFG4 579 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 C18orf25Q96B23 403 aaPredicted RBP12.69□□□□□ -0.38
SRPRA-203ENST00000528744 ADPGKQ9BRR6 497 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 ZDHHC7Q9NXF8 308 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 VPS13AQ96RL7 3174 aa12.69□□□□□ -0.38
SRPRA-203ENST00000528744 ANHXE9PGG2 379 aa12.68□□□□□ -0.38
SRPRA-203ENST00000528744 TMEM189-UBE2V1I3L0A0 370 aa12.68□□□□□ -0.38
SRPRA-203ENST00000528744 CCL16O15467 120 aa12.68□□□□□ -0.38
SRPRA-203ENST00000528744 TBC1D4O60343 1298 aa12.68□□□□□ -0.38
SRPRA-203ENST00000528744 CFHP08603 1231 aa12.68□□□□□ -0.38
SRPRA-203ENST00000528744 RAB33AQ14088 237 aa12.68□□□□□ -0.38
SRPRA-203ENST00000528744 SLC10A6Q3KNW5 377 aa12.68□□□□□ -0.38
SRPRA-203ENST00000528744 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
SRPRA-203ENST00000528744 GET4Q7L5D6 327 aaPredicted RBP12.68□□□□□ -0.38
SRPRA-203ENST00000528744 SYT2Q8N9I0 419 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms