RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 PTPN22Q9Y2R2 807 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 ADGRA3Q8IWK6 1321 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 ATXN2Q99700 1313 aaKnown RBP11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 IFT88Q13099 833 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 QPCTQ16769 361 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 CLEC16AQ2KHT3 1053 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 UBAP2Q5T6F2 1119 aaKnown RBP11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 FAM213AQ9BRX8 229 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 C17orf75Q9HAS0 396 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 MTRF1LQ9UGC7 380 aaKnown RBP11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 PARP2Q9UGN5 583 aa11.26□□□□□ -0.61
AP002008.3-201ENST00000528614 PAEPP09466 180 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 GBP1P32455 592 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 BYSLQ13895 437 aaKnown RBP11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 RNF187Q5TA31 235 aaPredicted RBP11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 XRRA1Q6P2D8 792 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 USP37Q86T82 979 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 PSPC1Q8WXF1 523 aaKnown RBP11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 ZNF516Q92618 1163 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 GPRASP2Q96D09 838 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 BICD1Q96G01 975 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 PDLIM7Q9NR12 457 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 GGA2Q9UJY4 613 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 SMIM23A6NLE4 172 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 HNRNPDLO14979 420 aaKnown RBP11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 MAFGO15525 162 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 CLDN3O15551 220 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 SORBS3O60504 671 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 RXRBP28702 533 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 MAPK4P31152 587 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 SP4Q02446 784 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 C6orf89Q6UWU4 347 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 TAS1R3Q7RTX0 852 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 YTHDF3Q7Z739 585 aaKnown RBP11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 PHLDB2Q86SQ0 1253 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 UHMK1Q8TAS1 419 aaKnown RBP11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 KAT2BQ92831 832 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 ATP6V0A1Q93050 837 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 ART4Q93070 314 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 RUNDC3BQ96NL0 473 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 CNOT10Q9H9A5 744 aaKnown RBP11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 XPNPEP1Q9NQW7 623 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 GINM1Q9NU53 330 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 DDX20Q9UHI6 824 aaKnown RBP11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 CAPN7Q9Y6W3 813 aa11.25□□□□□ -0.61
AP002008.3-201ENST00000528614 RGS20O76081 388 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 FDX1P10109 184 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 KCNA2P16389 499 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 GARTP22102 1010 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 SCP2P22307 547 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 FGFR4P22455 802 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 BRDTQ58F21 947 aaPredicted RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 LMBRD2Q68DH5 695 aaPredicted RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 C3orf20Q8ND61 904 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 C1orf54Q8WWF1 131 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 CPA5Q8WXQ8 436 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 PGM2Q96G03 612 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 TAOK3Q9H2K8 898 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 AZI2Q9H6S1 392 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 LRRC19Q9H756 370 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 CNOT7Q9UIV1 285 aaKnown RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 ANAPC7Q9UJX3 599 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 FSCN2O14926 492 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 DKC1O60832 514 aaKnown RBP eCLIP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 DGAT1O75907 488 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 PSAPP07602 524 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 UNGP13051 313 aaPredicted RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 FNTAP49354 379 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 IFI35P80217 286 aaPredicted RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 GCNT1Q02742 428 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 SNX1Q13596 522 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 CYFIP1Q7L576 1253 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 ENOSF1Q7L5Y1 443 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 MCOLN2Q8IZK6 566 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 C12orf50Q8NA57 414 aaPredicted RBP11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 MCPH1Q8NEM0 835 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 IFT74Q96LB3 600 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 TRIM7Q9C029 511 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 CYP26B1Q9NR63 512 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 PASKQ96RG2 1323 aa11.24□□□□□ -0.61
AP002008.3-201ENST00000528614 RGS16O15492 202 aaPredicted RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ECEL1O95672 775 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 RARGP13631 454 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 CDR1P51861 262 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 BACE1P56817 501 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 SLMAPQ14BN4 828 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 PPP1R7Q15435 360 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 C6orf118Q5T5N4 469 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 ERMARDQ5T6L9 678 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 NBPF12Q5TAG4 269 aaPredicted RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 FBXW10Q5XX13 1052 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 EGFL6Q8IUX8 553 aa11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
AP002008.3-201ENST00000528614 JDP2Q8WYK2 163 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms