RNA–Protein interactions for RNA: ENST00000528324.5

CMTM1-209, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-209ENST00000528324 SNX27Q96L92 541 aa15.31■□□□□ 0.04
CMTM1-209ENST00000528324 FBXL18Q96ME1 805 aa15.31■□□□□ 0.04
CMTM1-209ENST00000528324 CEP63Q96MT8 703 aa15.31■□□□□ 0.04
CMTM1-209ENST00000528324 CASD1Q96PB1 797 aa15.31■□□□□ 0.04
CMTM1-209ENST00000528324 ANP32EQ9BTT0 268 aa15.31■□□□□ 0.04
CMTM1-209ENST00000528324 DMAC2Q9NW81 257 aa15.31■□□□□ 0.04
CMTM1-209ENST00000528324 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
CMTM1-209ENST00000528324 DERAQ9Y315 318 aa15.31■□□□□ 0.04
CMTM1-209ENST00000528324 GOLGA8IPA6NC78 632 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 GOLGA8JA6NMD2 632 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 MAPK13O15264 365 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 FAM189A1O60320 539 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 CAVIN2O95810 425 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 GNA14O95837 355 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 CXCL8P10145 99 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
CMTM1-209ENST00000528324 KRT13P13646 458 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 KCNE1P15382 129 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 CD44P16070 742 aaKnown RBP15.3■□□□□ 0.04
CMTM1-209ENST00000528324 TYRO3Q06418 890 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 ENOX2Q16206 610 aaKnown RBP15.3■□□□□ 0.04
CMTM1-209ENST00000528324 FNDC1Q4ZHG4 1894 aaPredicted RBP15.3■□□□□ 0.04
CMTM1-209ENST00000528324 PAN2Q504Q3 1202 aaKnown RBP15.3■□□□□ 0.04
CMTM1-209ENST00000528324 SEZ6Q53EL9 994 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 TMCO2Q7Z6W1 182 aaPredicted RBP15.3■□□□□ 0.04
CMTM1-209ENST00000528324 CSGALNACT2Q8N6G5 542 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 CACTINQ8WUQ7 758 aaKnown RBP15.3■□□□□ 0.04
CMTM1-209ENST00000528324 ZFP42Q96MM3 310 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 FNBP1Q96RU3 617 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 MKNK1Q9BUB5 465 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 CNTN3Q9P232 1028 aa15.3■□□□□ 0.04
CMTM1-209ENST00000528324 TTC26A0AVF1 554 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 SYCE3A1L190 88 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 MEIS3P2A8K0S8 358 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 SLC16A3O15427 465 aaKnown RBP15.29■□□□□ 0.04
CMTM1-209ENST00000528324 POMCP01189 267 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 LAG3P18627 525 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 TNFSF9P41273 254 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 ALDH7A1P49419 539 aaKnown RBP15.29■□□□□ 0.04
CMTM1-209ENST00000528324 SCNN1GP51170 649 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 RABGGTBP53611 331 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 SLC10A6Q3KNW5 377 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 ZSCAN23Q3MJ62 389 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 XKR4Q5GH76 650 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 ALKAL1Q6UXT8 129 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 INTS8Q75QN2 995 aaKnown RBP15.29■□□□□ 0.04
CMTM1-209ENST00000528324 TMEM192Q8IY95 271 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 FAM186BQ8IYM0 893 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 RDH13Q8NBN7 331 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 SP7Q8TDD2 431 aaPredicted RBP15.29■□□□□ 0.04
CMTM1-209ENST00000528324 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 SAMD11Q96NU1 681 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 SLC28A3Q9HAS3 691 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 RC3H2Q9HBD1 1191 aaKnown RBP15.29■□□□□ 0.04
CMTM1-209ENST00000528324 RNF19AQ9NV58 838 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 TBC1D13Q9NVG8 400 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
CMTM1-209ENST00000528324 C2CD2Q9Y426 696 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 PCDHB12Q9Y5F1 795 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 TRIP11Q15643 1979 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 TDRD15B5MCY1 1934 aaKnown RBP15.29■□□□□ 0.04
CMTM1-209ENST00000528324 PTPRSQ13332 1948 aa15.29■□□□□ 0.04
CMTM1-209ENST00000528324 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
CMTM1-209ENST00000528324 SMIM28A0A1B0GU29 152 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 GRXCR1A8MXD5 290 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 LACTBL1A8MY62 500 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 STX10O60499 249 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 ADRB2P07550 413 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 AP3M2P53677 418 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 STX17P56962 302 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 ENPEPQ07075 957 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 CYP24A1Q07973 514 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 TMEM132DQ14C87 1099 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 ZBTB41Q5SVQ8 909 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 TTI2Q6NXR4 508 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 CRELD2Q6UXH1 353 aaPredicted RBP15.28■□□□□ 0.04
CMTM1-209ENST00000528324 CBWD2Q8IUF1 395 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 BEST2Q8NFU1 509 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 DDX27Q96GQ7 796 aaKnown RBP15.28■□□□□ 0.04
CMTM1-209ENST00000528324 UROC1Q96N76 676 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 TMEM175Q9BSA9 504 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 PBX4Q9BYU1 374 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 METTL14Q9HCE5 456 aaKnown RBP15.28■□□□□ 0.04
CMTM1-209ENST00000528324 UBQLN1Q9UMX0 589 aaKnown RBP15.28■□□□□ 0.04
CMTM1-209ENST00000528324 COL4A6Q14031 1691 aa15.28■□□□□ 0.04
CMTM1-209ENST00000528324 RALGAPA2Q2PPJ7 1873 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 TRIM49BA6NDI0 452 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 ALDH2P05091 517 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 CA3P07451 260 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 CYP3A5P20815 502 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 PPM1AP35813 382 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 GATMP50440 423 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 PMS1P54277 932 aaKnown RBP15.27■□□□□ 0.04
CMTM1-209ENST00000528324 TUSC3Q13454 348 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 PSMD6Q15008 389 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 PPP2R2DQ66LE6 453 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
CMTM1-209ENST00000528324 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.04
CMTM1-209ENST00000528324 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms