RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 RIPK2O43353 540 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 PIAS1O75925 651 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 ASNSP08243 561 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 CD58P19256 250 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 SCP2P22307 547 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 RWDD2BP57060 319 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 DHX34Q14147 1143 aaKnown RBP7.98□□□□□ -1.13
C11orf54-207ENST00000528288 C11orf63Q6NUN7 778 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 ANKS1BQ7Z6G8 1248 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 FBXL13Q8NEE6 735 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.98□□□□□ -1.13
C11orf54-207ENST00000528288 SHC3Q92529 594 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 CD101Q93033 1021 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 ZKSCAN4Q969J2 545 aaPredicted RBP7.98□□□□□ -1.13
C11orf54-207ENST00000528288 HAUS1Q96CS2 278 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 CHMP6Q96FZ7 201 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 PDCD2LQ9BRP1 358 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 CDC42EP4Q9H3Q1 356 aaKnown RBP7.98□□□□□ -1.13
C11orf54-207ENST00000528288 RPAP3Q9H6T3 665 aaPredicted RBP7.98□□□□□ -1.13
C11orf54-207ENST00000528288 EFCC1Q9HA90 598 aa7.98□□□□□ -1.13
C11orf54-207ENST00000528288 COL4A5P29400 1685 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 A6NNZ2 444 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 ECEL1O95672 775 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 TCF4P15884 667 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 SMTNP53814 917 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 PSMC5P62195 406 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 CDR2Q01850 454 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 TUBB8Q3ZCM7 444 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 ZNF394Q53GI3 561 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 GKAP1Q5VSY0 366 aaPredicted RBP7.97□□□□□ -1.13
C11orf54-207ENST00000528288 SAMD7Q7Z3H4 446 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 HOOK3Q86VS8 718 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 SCLT1Q96NL6 688 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 GMLQ99445 158 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 ANKFY1Q9P2R3 1169 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 MTRF1LQ9UGC7 380 aaKnown RBP7.97□□□□□ -1.13
C11orf54-207ENST00000528288 MTUS1Q9ULD2 1270 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 PTPRJQ12913 1337 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 UMODL1Q5DID0 1318 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 MIF4GDA9UHW6 222 aaKnown RBP7.97□□□□□ -1.13
C11orf54-207ENST00000528288 GRIN3BO60391 1043 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 GH1P01241 217 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 DPEP1P16444 411 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 CXCL9Q07325 125 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 TRAF1Q13077 416 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 CALCOCO2Q13137 446 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 AUHQ13825 339 aaKnown RBP7.97□□□□□ -1.13
C11orf54-207ENST00000528288 ERMARDQ5T6L9 678 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 PCNX4Q63HM2 1172 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 CNPY4Q8N129 248 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 EIF1ADQ8N9N8 165 aaKnown RBP7.97□□□□□ -1.13
C11orf54-207ENST00000528288 DYDC1Q8WWB3 177 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 DDX1Q92499 740 aaKnown RBP7.97□□□□□ -1.13
C11orf54-207ENST00000528288 FAM212AQ96EL1 285 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 C9orf72Q96LT7 481 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 WNT8AQ9H1J5 351 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 PXMP2Q9NR77 195 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 FSBPO95073 299 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 ADCY8P40145 1251 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 NLRP11P59045 1033 aaKnown RBP7.97□□□□□ -1.13
C11orf54-207ENST00000528288 FSTL1Q12841 308 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 ANKRD20A8PQ5CZ79 823 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 NLRX1Q86UT6 975 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 GPATCH11Q8N954 259 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 HVCN1Q96D96 273 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 FAM129AQ9BZQ8 928 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 C10orf88Q9H8K7 445 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 AAASQ9NRG9 546 aa7.97□□□□□ -1.13
C11orf54-207ENST00000528288 DIS3Q9Y2L1 958 aaKnown RBP7.97□□□□□ -1.13
C11orf54-207ENST00000528288 KIF13BQ9NQT8 1826 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 WDR64B1ANS9 1081 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 CYP1A2P05177 515 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 RALAP11233 206 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 KRT10P13645 584 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 SCTRP47872 440 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 ITGA8P53708 1063 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 NCKAP1LP55160 1127 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 TAS2R40P59535 323 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 CYP24A1Q07973 514 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 ADCY2Q08462 1091 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 E2F5Q15329 346 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 ACAD10Q6JQN1 1059 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 CYP4F22Q6NT55 531 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 CEP57Q86XR8 500 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 CCDC60Q8IWA6 550 aaPredicted RBP7.96□□□□□ -1.13
C11orf54-207ENST00000528288 CYP4X1Q8N118 509 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 IPO4Q8TEX9 1081 aaKnown RBP7.96□□□□□ -1.13
C11orf54-207ENST00000528288 ZNF526Q8TF50 670 aaPredicted RBP7.96□□□□□ -1.13
C11orf54-207ENST00000528288 ATXN2LQ8WWM7 1075 aaKnown RBP7.96□□□□□ -1.13
C11orf54-207ENST00000528288 PSPC1Q8WXF1 523 aaKnown RBP7.96□□□□□ -1.13
C11orf54-207ENST00000528288 CEP89Q96ST8 783 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 PAIP2Q9BPZ3 127 aaKnown RBP7.96□□□□□ -1.13
C11orf54-207ENST00000528288 TMEM8AQ9HCN3 771 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 RNF146Q9NTX7 359 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 PCYOX1Q9UHG3 505 aa7.96□□□□□ -1.13
C11orf54-207ENST00000528288 RBBP6Q7Z6E9 1792 aaKnown RBP7.96□□□□□ -1.14
C11orf54-207ENST00000528288 MROH7Q68CQ1 1323 aa7.96□□□□□ -1.14
C11orf54-207ENST00000528288 PASKQ96RG2 1323 aa7.96□□□□□ -1.14
C11orf54-207ENST00000528288 TP73O15350 636 aa7.96□□□□□ -1.14
C11orf54-207ENST00000528288 ZSCAN5DPP0CG00 497 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms