RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ANKEF1Q9NU02 776 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 MTF2Q9Y483 593 aaPredicted RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 SLC30A4O14863 429 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 LRP3O75074 770 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 EFEMP2O95967 443 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 HNRNPA1P09651 372 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPSF1-203ENST00000527916 CTTNQ14247 550 aaKnown RBP11.67□□□□□ -0.54
CPSF1-203ENST00000527916 PCBP1Q15365 356 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPSF1-203ENST00000527916 LAIR1Q6GTX8 287 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 LILRA6Q6PI73 481 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 ZNF852Q6ZMS4 543 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 GLYCTKQ8IVS8 523 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 KSR1Q8IVT5 923 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 CCDC83Q8IWF9 413 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 TPH2Q8IWU9 490 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 HACE1Q8IYU2 909 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 CELF5Q8N6W0 485 aaKnown RBP11.67□□□□□ -0.54
CPSF1-203ENST00000527916 FBXO18Q8NFZ0 1043 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 PRPF31Q8WWY3 499 aaKnown RBP11.67□□□□□ -0.54
CPSF1-203ENST00000527916 DDX1Q92499 740 aaKnown RBP11.67□□□□□ -0.54
CPSF1-203ENST00000527916 FGF13Q92913 245 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 C8orf76Q96K31 380 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 COL4A3BPQ9Y5P4 624 aa11.67□□□□□ -0.54
CPSF1-203ENST00000527916 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-203ENST00000527916 ARL5CA6NH57 179 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 WNT7AO00755 349 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 FOXD2O60548 495 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-203ENST00000527916 XYLBO75191 536 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 DGAT1O75907 488 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 ERLIN2O94905 339 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 CD72P21854 359 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 TXKP42681 527 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 DSC1Q08554 894 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 NCBP1Q09161 790 aaKnown RBP11.66□□□□□ -0.54
CPSF1-203ENST00000527916 SPEM2Q0P670 501 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 LAMTOR4Q0VGL1 99 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 MXD4Q14582 209 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-203ENST00000527916 XKR9Q5GH70 373 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 PPM1LQ5SGD2 360 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 FUT10Q6P4F1 479 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 TSSK4Q6SA08 328 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 TPRG1Q6ZUI0 275 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-203ENST00000527916 GAD1Q99259 594 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 MTRQ99707 1265 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 PARD6AQ9NPB6 346 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 PRMT8Q9NR22 394 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-203ENST00000527916 FRYQ5TBA9 3013 aa11.66□□□□□ -0.54
CPSF1-203ENST00000527916 RALGAPA1Q6GYQ0 2036 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 FASNP49327 2511 aaKnown RBP11.65□□□□□ -0.54
CPSF1-203ENST00000527916 ZBTB39O15060 712 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 RETP07949 1114 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 SRGAP2CP0DJJ0 459 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 AXLP30530 894 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 HOXA11P31270 313 aaPredicted RBP11.65□□□□□ -0.54
CPSF1-203ENST00000527916 MLH1P40692 756 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 TRAPPC10P48553 1259 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 CYP4A11Q02928 519 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 ADCY1Q08828 1119 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 EMC2Q15006 297 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 TMEM143Q96AN5 459 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 CCDC51Q96ER9 411 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 B3GALT6Q96L58 329 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 KXD1Q9BQD3 176 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 IER2Q9BTL4 223 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 GPR62Q9BZJ7 368 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 ADAM28Q9UKQ2 775 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 ANGPTL2Q9UKU9 493 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 POLIQ9UNA4 740 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 IPPQ9Y573 584 aa11.65□□□□□ -0.54
CPSF1-203ENST00000527916 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.65□□□□□ -0.54
CPSF1-203ENST00000527916 TDRD15B5MCY1 1934 aaKnown RBP11.64□□□□□ -0.55
CPSF1-203ENST00000527916 TADA2AO75478 443 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 C8AP07357 584 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 RPL17P18621 184 aaKnown RBP11.64□□□□□ -0.55
CPSF1-203ENST00000527916 MUTP22033 750 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 KCNA4P22459 653 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 TARSP26639 723 aaKnown RBP11.64□□□□□ -0.55
CPSF1-203ENST00000527916 HOXA9P31269 272 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 MCM7P33993 719 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 RARRES1P49788 294 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 SCNN1GP51170 649 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 FOSBP53539 338 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 PTENP60484 403 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 NTHL1P78549 312 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 GUCY1B3Q02153 619 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 MTAPQ13126 283 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 RABEP1Q15276 862 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 NOTUMQ6P988 496 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 PRR23BQ6ZRT6 265 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 FAM184AQ8NB25 1140 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 RNF149Q8NC42 400 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 SMG8Q8ND04 991 aaKnown RBP11.64□□□□□ -0.55
CPSF1-203ENST00000527916 ZFP42Q96MM3 310 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 POLR3CQ9BUI4 534 aaPredicted RBP11.64□□□□□ -0.55
CPSF1-203ENST00000527916 NFKBIZQ9BYH8 718 aa11.64□□□□□ -0.55
CPSF1-203ENST00000527916 TRIM6Q9C030 488 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms