RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 COMMD8Q9NX08 183 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 KLHL14Q9P2G3 628 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 CRNNQ9UBG3 495 aaPredicted RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 LIMA1Q9UHB6 759 aaKnown RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 DSEQ9UL01 958 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 SUGT1Q9Y2Z0 365 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 CLIC4Q9Y696 253 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 MROH7-TTC4A0A0A0MT08 1334 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 MYH7P12883 1935 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 A0A1W2PQC6 194 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 CCDC169A6NNP5 214 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 RASA4BC9J798 803 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 RASA4O43374 803 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 SLC26A4O43511 780 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 SH3BP5O60239 455 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 TSPAN1O60635 241 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 PRMT3O60678 531 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 BAIAP3O94812 1187 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 FBXO21O94952 628 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 AGTP01019 485 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 GLI1P08151 1106 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 ETS2P15036 469 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 ZNF12P17014 697 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 MARK3P27448 753 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 HMOX2P30519 316 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 HSPA1LP34931 641 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 NOS2P35228 1153 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 SERPINB6P35237 376 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
CD44-225ENST00000527326 WASHC5Q12768 1159 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 GRM2Q14416 872 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 LPIN1Q14693 890 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 WTAPQ15007 396 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 MEA1Q16626 185 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 ANKDD1AQ495B1 522 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 COBLL1Q53SF7 1204 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 WDR45BQ5MNZ6 344 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 MAP3K21Q5TCX8 1036 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 METTL21CQ5VZV1 264 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 TWF2Q6IBS0 349 aaKnown RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 SNRNP48Q6IEG0 339 aaKnown RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 TTC23LQ6PF05 361 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 C1orf228Q6PIY5 440 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 DHRS4L2Q6PKH6 230 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 CHSY3Q70JA7 882 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 COL23A1Q86Y22 540 aaPredicted RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 PALB2Q86YC2 1186 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 MCF2L2Q86YR7 1114 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 SLC9A9Q8IVB4 645 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 LARGE2Q8N3Y3 721 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 CRACR2BQ8N4Y2 399 aaPredicted RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 GOLM1Q8NBJ4 401 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 TPCN2Q8NHX9 752 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 UTP4Q969X6 686 aaKnown RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 SELENOSQ9BQE4 189 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 ANKRD2Q9GZV1 360 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 RSPH9Q9H1X1 276 aaPredicted RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 TLE6Q9H808 572 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 STRN4Q9NRL3 753 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 METTL5Q9NRN9 209 aaKnown RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 IGSF5Q9NSI5 407 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 RBM12Q9NTZ6 932 aaKnown RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 PLK2Q9NYY3 685 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.19□□□□□ -1.42
CD44-225ENST00000527326 MARK1Q9P0L2 795 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 STX18Q9P2W9 335 aaKnown RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 DNAJB4Q9UDY4 337 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 TRIM10Q9UDY6 481 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 PRKAG3Q9UGI9 489 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 STX8Q9UNK0 236 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 DMTF1Q9Y222 760 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 STXBP5LQ9Y2K9 1186 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 TRIM17Q9Y577 477 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 NOX1Q9Y5S8 564 aa6.19□□□□□ -1.42
CD44-225ENST00000527326 ZNF335Q9H4Z2 1342 aaPredicted RBP6.19□□□□□ -1.42
CD44-225ENST00000527326 CARMIL3Q8ND23 1372 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 KIF20BQ96Q89 1820 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 LOC105371267A0A1B0GV96 52 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 NOTOA8MTQ0 251 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 E9PMD0 336 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 CES2O00748 559 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 CPLX1O14810 134 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 AP1G1O43747 822 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 DTNBO60941 627 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 ADAM23O75077 832 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 DCTN3O75935 186 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 UBTFL6P0CB48 400 aaPredicted RBP6.18□□□□□ -1.42
CD44-225ENST00000527326 BMP6P22004 513 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 BDNFP23560 247 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 CDC27P30260 824 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 GTF2H1P32780 548 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 ETV3P41162 512 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 RPL5P46777 297 aaKnown RBP6.18□□□□□ -1.42
CD44-225ENST00000527326 DGKGP49619 791 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 XIAPP98170 497 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 DR1Q01658 176 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 DSG1Q02413 1049 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 HSPA14Q0VDF9 509 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 TRIM29Q14134 588 aa6.18□□□□□ -1.42
CD44-225ENST00000527326 GIT2Q14161 759 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms