RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 USP20Q9Y2K6 914 aa14.72□□□□□ -0.05
CAPN1-207ENST00000527189 CCDC195A0A1B0GUA6 201 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 TMEM189-UBE2V1I3L0A0 370 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 BRD1O95696 1058 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 WEE2P0C1S8 567 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 PDCP20941 246 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 SCP2P22307 547 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 GRM5P41594 1212 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 YARSP54577 528 aaKnown RBP14.71□□□□□ -0.05
CAPN1-207ENST00000527189 MTMR3Q13615 1198 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 CUL4AQ13619 759 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 XKR4Q5GH76 650 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 LILRA6Q6PI73 481 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 ALKAL1Q6UXT8 129 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 CCDC149Q6ZUS6 474 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 KREMEN2Q8NCW0 462 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-207ENST00000527189 PIK3R5Q8WYR1 880 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 KCNN1Q92952 543 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 PNMA5Q96PV4 448 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 PPP1R10Q96QC0 940 aaKnown RBP14.71□□□□□ -0.05
CAPN1-207ENST00000527189 PRRX2Q99811 253 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 PAAF1Q9BRP4 392 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 TTPALQ9BTX7 342 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 CCDC94Q9BW85 323 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-207ENST00000527189 ZDHHC7Q9NXF8 308 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 GDAQ9Y2T3 454 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 KMT2EQ8IZD2 1858 aa14.71□□□□□ -0.05
CAPN1-207ENST00000527189 CASTOR2A6NHX0 329 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 H0YCG3 227 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 TGM5O43548 720 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 PLA2G4BP0C869 781 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 MCF2P10911 925 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 PLS3P13797 630 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 PROZP22891 400 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 SP100P23497 879 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-207ENST00000527189 UBA7P41226 1012 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 SLC12A3P55017 1021 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 STRN3Q13033 797 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 ZRSR1Q15695 479 aaKnown RBP14.7□□□□□ -0.06
CAPN1-207ENST00000527189 TMEM119Q4V9L6 283 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 FAM171A1Q5VUB5 890 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 DCLRE1AQ6PJP8 1040 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 SUGP1Q8IWZ8 645 aaKnown RBP14.7□□□□□ -0.06
CAPN1-207ENST00000527189 FBXL6Q8N531 539 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 STAMQ92783 540 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 ASIC4Q96FT7 647 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 CALML4Q96GE6 196 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 WDR6Q9NNW5 1121 aaKnown RBP14.7□□□□□ -0.06
CAPN1-207ENST00000527189 SLC38A7Q9NVC3 462 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 LARSQ9P2J5 1176 aaKnown RBP14.7□□□□□ -0.06
CAPN1-207ENST00000527189 LIMD1Q9UGP4 676 aa14.7□□□□□ -0.06
CAPN1-207ENST00000527189 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 SFI1A8K8P3 1242 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 TRAPPC3O43617 180 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 TOM1L1O75674 476 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 KIF4AO95239 1232 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 LONP1P36776 959 aaKnown RBP14.69□□□□□ -0.06
CAPN1-207ENST00000527189 ZNF568Q3ZCX4 644 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 RTP2Q5QGT7 225 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 MPZL3Q6UWV2 235 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 ZPBP2Q6X784 338 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 TAS1R3Q7RTX0 852 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 PALB2Q86YC2 1186 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 LNX1Q8TBB1 728 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-207ENST00000527189 RABGGTAQ92696 567 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 DDX27Q96GQ7 796 aaKnown RBP14.69□□□□□ -0.06
CAPN1-207ENST00000527189 B3GALT6Q96L58 329 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 ACAP3Q96P50 834 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 TCHPQ9BT92 498 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 TARS2Q9BW92 718 aaKnown RBP14.69□□□□□ -0.06
CAPN1-207ENST00000527189 CDT1Q9H211 546 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 ODF2LQ9ULJ1 636 aa14.69□□□□□ -0.06
CAPN1-207ENST00000527189 RIF1Q5UIP0 2472 aaKnown RBP14.69□□□□□ -0.06
CAPN1-207ENST00000527189 PTPRZ1P23471 2315 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-207ENST00000527189 SLC16A4O15374 487 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 B3GAT3O94766 335 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 NUBP1P53384 320 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 UPP1Q16831 310 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-207ENST00000527189 RTL10Q7L3V2 364 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 CEP57Q86XR8 500 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 TMEM161BQ8NDZ6 487 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 PRSS33Q8NF86 280 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 CLSTN3Q9BQT9 956 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 PRKD2Q9BZL6 878 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 CXCL16Q9H2A7 254 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 CACNG4Q9UBN1 327 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 MYO10Q9HD67 2058 aa14.68□□□□□ -0.06
CAPN1-207ENST00000527189 PLXNA3P51805 1871 aa14.67□□□□□ -0.06
CAPN1-207ENST00000527189 DNAH14Q0VDD8 3507 aa14.67□□□□□ -0.06
CAPN1-207ENST00000527189 ABLIM1O14639 778 aa14.67□□□□□ -0.06
CAPN1-207ENST00000527189 MAPTP10636 758 aaKnown RBP14.67□□□□□ -0.06
CAPN1-207ENST00000527189 KCNE1P15382 129 aa14.67□□□□□ -0.06
CAPN1-207ENST00000527189 FGFR3P22607 806 aa14.67□□□□□ -0.06
CAPN1-207ENST00000527189 RPL9P32969 192 aaKnown RBP14.67□□□□□ -0.06
CAPN1-207ENST00000527189 ABCD1P33897 745 aa14.67□□□□□ -0.06
CAPN1-207ENST00000527189 CLCNKBP51801 687 aa14.67□□□□□ -0.06
CAPN1-207ENST00000527189 PSMD5Q16401 504 aa14.67□□□□□ -0.06
CAPN1-207ENST00000527189 UVSSAQ2YD98 709 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms