RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 AGTP01019 485 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 PTGS2P35354 604 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 CLK1P49759 484 aaKnown RBP13.05□□□□□ -0.32
FGFR1-227ENST00000526570 PUDPQ08623 228 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 DDX20Q9UHI6 824 aaKnown RBP13.05□□□□□ -0.32
FGFR1-227ENST00000526570 TMCO1Q9UM00 188 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 SNX12Q9UMY4 172 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 K7ENM7 598 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 ELF3P78545 371 aaPredicted RBP13.05□□□□□ -0.32
FGFR1-227ENST00000526570 FAM160B1Q5W0V3 765 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 ZBTB8OSQ8IWT0 167 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 ZNF577Q9BSK1 485 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 PANK4Q9NVE7 773 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
FGFR1-227ENST00000526570 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 SERPING1P05155 500 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 TNNI1P19237 187 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 PEX5LQ8IYB4 626 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 DCLRE1BQ9H816 532 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 CYTH3O43739 400 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 ITPK1Q13572 414 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 PCDHB13Q9Y5F0 798 aa13.05□□□□□ -0.32
FGFR1-227ENST00000526570 PITPNM2Q9BZ72 1349 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 IL10P22301 178 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 RGS2P41220 211 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 SGO2Q562F6 1265 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 NRBP2Q9NSY0 501 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 SPATA31D1Q6ZQQ2 1576 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 FAM196BA6NMK8 535 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 POLGP54098 1239 aaPredicted RBP13.04□□□□□ -0.32
FGFR1-227ENST00000526570 CDC37Q16543 378 aaPredicted RBP13.04□□□□□ -0.32
FGFR1-227ENST00000526570 KLHL12Q53G59 568 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 RNF34Q969K3 372 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 TRIM45Q9H8W5 580 aaPredicted RBP13.04□□□□□ -0.32
FGFR1-227ENST00000526570 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 ADA2Q9NZK5 511 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 MID2Q9UJV3 735 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 SOX13Q9UN79 622 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 IDH3BO43837 385 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
FGFR1-227ENST00000526570 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
FGFR1-227ENST00000526570 LIG4P49917 911 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 PRR5LQ6MZQ0 368 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 ZFYVE1Q9HBF4 777 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 TRIM33Q9UPN9 1127 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 COMMD3-BMI1R4GMX3 469 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 PGM3O95394 542 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
FGFR1-227ENST00000526570 P3H1Q32P28 736 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 TMEM179Q6ZVK1 233 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 BBS2Q9BXC9 721 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 ZCWPW1Q9H0M4 648 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 TMEM245Q9H330 911 aa13.04□□□□□ -0.32
FGFR1-227ENST00000526570 ARMCX3Q9UH62 379 aaPredicted RBP13.04□□□□□ -0.32
FGFR1-227ENST00000526570 NSFP46459 744 aaKnown RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 RESP18Q5W5W9 173 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 MICU2Q8IYU8 434 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 FER1L4A9Z1Z3 1794 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 IQSEC2Q5JU85 1478 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 CD163L1Q9NR16 1453 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 PODXLO00592 558 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 MAP2K7O14733 419 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 SNPHO15079 494 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 CCND2P30279 289 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 PEX5P50542 639 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 TRIP13Q15645 432 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 TSC22D1Q15714 1073 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 UBE2SQ16763 222 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 C10orf76Q5T2E6 689 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 TRIM67Q6ZTA4 783 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 LPCAT2Q7L5N7 544 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 MYOCDQ8IZQ8 938 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 GALNT4Q8N4A0 578 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 DHTKD1Q96HY7 919 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 DDX47Q9H0S4 455 aaKnown RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 ADD3Q9UEY8 706 aaKnown RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 ALOX15P16050 662 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 DENND6AQ8IWF6 608 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 C2orf69Q8N8R5 385 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 TC2NQ8N9U0 490 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 P2RX5Q93086 422 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 LENG1Q96BZ8 264 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 HNRNPRO43390 633 aaKnown RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 ATF7P17544 494 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 CCNCP24863 283 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 MESDQ14696 234 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 PPP6R3Q5H9R7 873 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-227ENST00000526570 B3GNT6Q6ZMB0 384 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 EEPD1Q7L9B9 569 aa13.03□□□□□ -0.32
FGFR1-227ENST00000526570 PBXIP1Q96AQ6 731 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms