RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-204ENST00000526430 NELL2Q99435 816 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 POLR3CQ9BUI4 534 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-204ENST00000526430 NIFKQ9BYG3 293 aaKnown RBP12.11□□□□□ -0.47
NEDD8-204ENST00000526430 CSRNP2Q9H175 543 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 MRPL17Q9NRX2 175 aaKnown RBP12.11□□□□□ -0.47
NEDD8-204ENST00000526430 DACT1Q9NYF0 836 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 PCDHA7Q9UN72 937 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 MAST4O15021 2626 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 COL4A2P08572 1712 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 AKAP13Q12802 2813 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 LAMA1P25391 3075 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 SDK1Q7Z5N4 2213 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 TM4SF5O14894 197 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 SPTLC2O15270 562 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 NCAM2O15394 837 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 MARCH6O60337 910 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 C22orf31O95567 290 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 BMP15O95972 392 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 VTNP04004 478 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
NEDD8-204ENST00000526430 ADH1AP07327 375 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 EIF4BP23588 611 aaKnown RBP12.1□□□□□ -0.47
NEDD8-204ENST00000526430 RPA1P27694 616 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 QARSP47897 775 aaKnown RBP12.1□□□□□ -0.47
NEDD8-204ENST00000526430 PSMC5P62195 406 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 PFKPQ01813 784 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 CYP4A11Q02928 519 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 SLC44A4Q53GD3 710 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 HYIQ5T013 277 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 IL31Q6EBC2 164 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 SHC4Q6S5L8 630 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 TSSK4Q6SA08 328 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 KCNK18Q7Z418 384 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 C4orf19Q8IY42 314 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 LEO1Q8WVC0 666 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-204ENST00000526430 TRAIPQ9BWF2 469 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 LRWD1Q9UFC0 647 aa12.1□□□□□ -0.47
NEDD8-204ENST00000526430 A0A087X0B3 334 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 TMEM8BA6NDV4 472 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 GDF9O60383 454 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 GLUD1P00367 558 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 LRSAM1Q6UWE0 723 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 CLEC17AQ6ZS10 378 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 GET4Q7L5D6 327 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-204ENST00000526430 TPH2Q8IWU9 490 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 FGF14Q92915 247 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 PPP1R16BQ96T49 567 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 SH2D3AQ9BRG2 576 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 LXNQ9BS40 222 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 IER2Q9BTL4 223 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 GDPD2Q9HCC8 539 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 ZDHHC7Q9NXF8 308 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 CEP131Q9UPN4 1083 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 SSX2IPQ9Y2D8 614 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 ADAMTS20P59510 1910 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 TICRRQ7Z2Z1 1910 aa12.09□□□□□ -0.47
NEDD8-204ENST00000526430 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 C1QTNF9BB2RNN3 333 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 BACH1O14867 736 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 RFPL2O75678 378 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 OATP04181 439 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 C1QTNF9P0C862 333 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 TARSP26639 723 aaKnown RBP12.08□□□□□ -0.48
NEDD8-204ENST00000526430 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
NEDD8-204ENST00000526430 SLC11A1P49279 550 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 NPEPPSP55786 919 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 PRKCEQ02156 737 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 PPP2R5DQ14738 602 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 STK38Q15208 465 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 TMEM119Q4V9L6 283 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 XKR3Q5GH77 459 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 FAM160B1Q5W0V3 765 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 GLB1LQ6UWU2 654 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 MTSS1LQ765P7 747 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
NEDD8-204ENST00000526430 LINC01465Q8N7H1 131 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 RPS6KC1Q96S38 1066 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 RPP25Q9BUL9 199 aaKnown RBP12.08□□□□□ -0.48
NEDD8-204ENST00000526430 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 ADAMTS10Q9H324 1103 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 PLEKHA4Q9H4M7 779 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 TUFT1Q9NNX1 390 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
NEDD8-204ENST00000526430 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 TEX28O15482 410 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 SOD2P04179 222 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 URODP06132 367 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 XRCC6P12956 609 aaKnown RBP eCLIP12.07□□□□□ -0.48
NEDD8-204ENST00000526430 MUTP22033 750 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 PHKA2P46019 1235 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 NLRP11P59045 1033 aaKnown RBP12.07□□□□□ -0.48
NEDD8-204ENST00000526430 KRT85P78386 507 aa12.07□□□□□ -0.48
NEDD8-204ENST00000526430 MTAPQ13126 283 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms