RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 DLGAP2Q9P1A6 1054 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 RABL2AQ9UBK7 228 aaPredicted RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 TLR2O60603 784 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 PASD1Q8IV76 773 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 ELP3Q9H9T3 547 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 EXOC7Q9UPT5 735 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
USP35-201ENST00000526425 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 OPA1O60313 960 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 KRT14P02533 472 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 EIF4BP23588 611 aaKnown RBP10.54□□□□□ -0.72
USP35-201ENST00000526425 ACOT2P49753 483 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 GALCP54803 685 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 DLG4P78352 724 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 CBWD6Q4V339 395 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 CBWD3Q5JTY5 395 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 CBWD5Q5RIA9 395 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 OLFML2BQ68BL8 750 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 ZNF280DQ6N043 979 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 ZNF720Q7Z2F6 126 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 CDR2LQ86X02 465 aaPredicted RBP10.54□□□□□ -0.72
USP35-201ENST00000526425 DDX42Q86XP3 938 aaKnown RBP eCLIP10.54□□□□□ -0.72
USP35-201ENST00000526425 CBWD2Q8IUF1 395 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 IFT20Q8IY31 132 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
USP35-201ENST00000526425 SLC35C1Q96A29 364 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 C15orf41Q9Y2V0 281 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 ASTN1O14525 1302 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 DDX60LQ5H9U9 1706 aaKnown RBP10.54□□□□□ -0.72
USP35-201ENST00000526425 CYP3A7-CYP3A51PA0A087WV96 503 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 SMAPO00193 183 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 LDHAP00338 332 aaKnown RBP10.54□□□□□ -0.72
USP35-201ENST00000526425 KRT19P08727 400 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 CYP3A7P24462 503 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 NNTQ13423 1086 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 WDR44Q5JSH3 913 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 MOXD1Q6UVY6 613 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 SLC30A5Q8TAD4 765 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 KAT5Q92993 513 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 ATP6V0A1Q93050 837 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 HSPBP1Q9NZL4 362 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 PTPN22Q9Y2R2 807 aa10.54□□□□□ -0.72
USP35-201ENST00000526425 IQCA1LA6NCM1 817 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 PHF20L1A8MW92 1017 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 CYP26A1O43174 497 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 EPHX2P34913 555 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 PSMC5P62195 406 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 UGCGQ16739 394 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 RNF220Q5VTB9 566 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 RBM12BQ8IXT5 1001 aaKnown RBP10.53□□□□□ -0.72
USP35-201ENST00000526425 LMNTD2Q8IXW0 634 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 ZSWIM2Q8NEG5 633 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 NSUN6Q8TEA1 469 aaKnown RBP10.53□□□□□ -0.72
USP35-201ENST00000526425 HSD17B14Q9BPX1 270 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 TTYH3Q9C0H2 523 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 OSGEPQ9NPF4 335 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 COL2A1P02458 1487 aaPredicted RBP10.53□□□□□ -0.72
USP35-201ENST00000526425 IGLV3-22A0A075B6J6 115 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 ANO9A1A5B4 782 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 FOXN3O00409 490 aaPredicted RBP10.53□□□□□ -0.72
USP35-201ENST00000526425 FAM200BP0CF97 657 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 SPIRE1Q08AE8 756 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 BFSP1Q12934 665 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 MAIP1Q8WWC4 291 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 PRCCQ92733 491 aaPredicted RBP10.53□□□□□ -0.72
USP35-201ENST00000526425 KLRG1Q96E93 195 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 RPGRIP1Q96KN7 1286 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 PDCD2LQ9BRP1 358 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 TEX13BQ9BXU2 312 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 TBC1D22BQ9NU19 505 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 SSU72P8A0A1W2PR75 194 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 RASSF9O75901 435 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 NOL4O94818 638 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 ATP6V1G2O95670 118 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 LINGO3P0C6S8 592 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 ALOX15P16050 662 aaPredicted RBP10.53□□□□□ -0.72
USP35-201ENST00000526425 CD58P19256 250 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 LSP1P33241 339 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 TUBB4BP68371 445 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 CNTN2Q02246 1040 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 ITGB3BPQ13352 177 aaPredicted RBP10.53□□□□□ -0.72
USP35-201ENST00000526425 FIGNQ5HY92 759 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 TMEM154Q6P9G4 183 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 SLC20A1Q8WUM9 679 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 SLC5A5Q92911 643 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 ZNF653Q96CK0 615 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 HVCN1Q96D96 273 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 FGD4Q96M96 766 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 TMEM206Q9H813 350 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 NAGPAQ9UK23 515 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 PCDHA10Q9Y5I2 948 aa10.53□□□□□ -0.72
USP35-201ENST00000526425 LTBP1Q14766 1721 aa10.52□□□□□ -0.72
USP35-201ENST00000526425 H0Y3Z8 333 aa10.52□□□□□ -0.72
USP35-201ENST00000526425 TGFB1I1O43294 461 aa10.52□□□□□ -0.72
USP35-201ENST00000526425 SMNDC1O75940 238 aaKnown RBP eCLIP10.52□□□□□ -0.72
USP35-201ENST00000526425 FGGP02679 453 aa10.52□□□□□ -0.72
USP35-201ENST00000526425 FTLP02792 175 aaPredicted RBP10.52□□□□□ -0.72
USP35-201ENST00000526425 CIITAP33076 1130 aa10.52□□□□□ -0.72
USP35-201ENST00000526425 SOX5P35711 763 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms