RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 FOXN1O15353 648 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 RBP3P10745 1247 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 GSPT1P15170 499 aaKnown RBP7.37□□□□□ -1.23
COPB1-204ENST00000526191 LAG3P18627 525 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 CHN2P52757 468 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 SLC5A3P53794 718 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 PER3P56645 1201 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 CLRN1P58418 232 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 RAP2BP61225 183 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 FSTL1Q12841 308 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 LY6G5CQ5SRR4 150 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 ATXN7L2Q5T6C5 722 aaPredicted RBP7.37□□□□□ -1.23
COPB1-204ENST00000526191 AFMIDQ63HM1 303 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 ZFP28Q8NHY6 868 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 PHACTR3Q96KR7 559 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 AGAP2Q99490 1192 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 PRRX2Q99811 253 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 ADI1Q9BV57 179 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 SPC25Q9HBM1 224 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 AKIP1Q9NQ31 210 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 MCM8Q9UJA3 840 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 SIK3Q9Y2K2 1263 aa7.37□□□□□ -1.23
COPB1-204ENST00000526191 PRDM2Q13029 1718 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 PNPLA7Q6ZV29 1317 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 RNASET2O00584 256 aaKnown RBP7.36□□□□□ -1.23
COPB1-204ENST00000526191 PJA2O43164 708 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 RAMP2O60895 175 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 NDUFA10O95299 355 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 AGXTP21549 392 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 MGAT1P26572 445 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 SP140Q13342 867 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 KLF1Q13351 362 aaPredicted RBP7.36□□□□□ -1.23
COPB1-204ENST00000526191 PTPAQ15257 358 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 FAM102AQ5T9C2 384 aaPredicted RBP7.36□□□□□ -1.23
COPB1-204ENST00000526191 LAIR1Q6GTX8 287 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 FAM180AQ6UWF9 173 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 CNTD1Q8N815 330 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 OR2I1PQ8NGU4 316 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 MYEOVQ96EZ4 313 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 SLC5A4Q9NY91 659 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 ZBTB21Q9ULJ3 1066 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 DMRT1Q9Y5R6 373 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 GPR45Q9Y5Y3 372 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 CFTRP13569 1480 aa7.36□□□□□ -1.23
COPB1-204ENST00000526191 DRGXA6NNA5 263 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 SNRPA1P09661 255 aaKnown RBP7.35□□□□□ -1.23
COPB1-204ENST00000526191 RAP2AP10114 183 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 FPR1P21462 350 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 GUCY1A2P33402 732 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 PLXDC1Q8IUK5 500 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 MRI1Q9BV20 369 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 SENP6Q9GZR1 1112 aaPredicted RBP7.35□□□□□ -1.23
COPB1-204ENST00000526191 LANCL2Q9NS86 450 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 ANKFY1Q9P2R3 1169 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 DNM3Q9UQ16 869 aa7.35□□□□□ -1.23
COPB1-204ENST00000526191 USP15Q9Y4E8 981 aaPredicted RBP7.35□□□□□ -1.23
COPB1-204ENST00000526191 AQRO60306 1485 aaKnown RBP eCLIP7.35□□□□□ -1.235e-8■■■□□ 15.4
COPB1-204ENST00000526191 SBNO2Q9Y2G9 1366 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 TMEM191CA6NGB0 347 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 TMEM200CA6NKL6 621 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 DIRC3C9JPN6 131 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 IARSP41252 1262 aaKnown RBP7.34□□□□□ -1.23
COPB1-204ENST00000526191 ALDH1A3P47895 512 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 SLC6A9P48067 706 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 MGAT2Q10469 447 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 BEAN1Q3B7T3 259 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 TMX1Q9H3N1 280 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 ZNF277Q9NRM2 450 aaPredicted RBP7.34□□□□□ -1.23
COPB1-204ENST00000526191 C11orf21Q9P2W6 132 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 AJAP1Q9UKB5 411 aaPredicted RBP7.34□□□□□ -1.23
COPB1-204ENST00000526191 ATP8A1Q9Y2Q0 1164 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 MAP3K2Q9Y2U5 619 aa7.34□□□□□ -1.23
COPB1-204ENST00000526191 IFT140Q96RY7 1462 aa7.33□□□□□ -1.24
COPB1-204ENST00000526191 GRID2IPA4D2P6 1211 aa7.33□□□□□ -1.24
COPB1-204ENST00000526191 PPFIA4O75335 1185 aa7.33□□□□□ -1.24
COPB1-204ENST00000526191 RRP12Q5JTH9 1297 aaKnown RBP7.33□□□□□ -1.24
COPB1-204ENST00000526191 CBARPQ8N350 705 aaPredicted RBP7.33□□□□□ -1.24
COPB1-204ENST00000526191 PPM1NQ8N819 430 aa7.33□□□□□ -1.24
COPB1-204ENST00000526191 DPF2Q92785 391 aa7.33□□□□□ -1.24
COPB1-204ENST00000526191 DKK2Q9UBU2 259 aa7.33□□□□□ -1.24
COPB1-204ENST00000526191 ACTL7AQ9Y615 435 aa7.33□□□□□ -1.24
COPB1-204ENST00000526191 GAGE12BA1L429 117 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 GAGE12HA6NDE8 117 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 ENDOD1O94919 500 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 IL2RBP14784 551 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 ATP5JP18859 108 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 PCSK1P29120 753 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 CLUL1Q15846 466 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 INAVAQ3KP66 663 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 GJC2Q5T442 439 aaPredicted RBP7.32□□□□□ -1.24
COPB1-204ENST00000526191 AGAP9Q5VTM2 703 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 MED25Q71SY5 747 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 NECAB2Q7Z6G3 386 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 CPEB3Q8NE35 698 aaKnown RBP7.32□□□□□ -1.24
COPB1-204ENST00000526191 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPB1-204ENST00000526191 ADAM2Q99965 735 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 MYOCQ99972 504 aa7.32□□□□□ -1.24
COPB1-204ENST00000526191 PUS7LQ9H0K6 701 aaKnown RBP7.32□□□□□ -1.24
COPB1-204ENST00000526191 MOCS1Q9NZB8 636 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms