RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZMAT4Q9H898 229 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 DDX21Q9NR30 783 aaKnown RBP eCLIP5.56□□□□□ -1.52
USP48-211ENST00000526044 SMC4Q9NTJ3 1288 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 HYPKQ9NX55 129 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 PRKAB1Q9Y478 270 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 UBR2Q8IWV8 1755 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 PAPPAQ13219 1627 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 KCPQ6ZWJ8 1503 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 LY75O60449 1722 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 K7ESM1 405 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 MAFGO15525 162 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 ZEB2O60315 1214 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 MYL6BP14649 208 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 BPIP17213 487 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 LSP1P33241 339 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 MEOX1P50221 254 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 EPHB4P54760 987 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 BCAR1P56945 870 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 PHC1P78364 1004 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 NOLC1Q14978 699 aaKnown RBP eCLIP5.55□□□□□ -1.52
USP48-211ENST00000526044 EZH2Q15910 746 aaKnown RBP5.55□□□□□ -1.52
USP48-211ENST00000526044 ZNF568Q3ZCX4 644 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 CT47A1Q5JQC4 288 aaPredicted RBP5.55□□□□□ -1.52
USP48-211ENST00000526044 RTKN2Q8IZC4 609 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.55□□□□□ -1.52
USP48-211ENST00000526044 ZNF610Q8N9Z0 462 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 RPGRQ92834 1020 aaKnown RBP5.55□□□□□ -1.52
USP48-211ENST00000526044 FRAT1Q92837 279 aaPredicted RBP5.55□□□□□ -1.52
USP48-211ENST00000526044 CAMKK2Q96RR4 588 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 TTC1Q99614 292 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 IFT22Q9H7X7 185 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 JADE2Q9NQC1 790 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 KCMF1Q9P0J7 381 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 USP36Q9P275 1121 aaKnown RBP5.55□□□□□ -1.52
USP48-211ENST00000526044 CHPF2Q9P2E5 772 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 NOB1Q9ULX3 412 aaKnown RBP5.55□□□□□ -1.52
USP48-211ENST00000526044 PTPN22Q9Y2R2 807 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 SLC4A7Q9Y6M7 1214 aa5.55□□□□□ -1.52
USP48-211ENST00000526044 ZNF831Q5JPB2 1677 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 SUV39H1O43463 412 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 RPS6KA4O75676 772 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 PRPF6O94906 941 aaKnown RBP5.54□□□□□ -1.52
USP48-211ENST00000526044 DDX58O95786 925 aaKnown RBP5.54□□□□□ -1.52
USP48-211ENST00000526044 ANXA1P04083 346 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 VIL1P09327 827 aaKnown RBP5.54□□□□□ -1.52
USP48-211ENST00000526044 IL6STP40189 918 aaPredicted RBP5.54□□□□□ -1.52
USP48-211ENST00000526044 CRKLP46109 303 aaKnown RBP5.54□□□□□ -1.52
USP48-211ENST00000526044 PIP4K2AP48426 406 aaPredicted RBP5.54□□□□□ -1.52
USP48-211ENST00000526044 RRADP55042 308 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 ADCY2Q08462 1091 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 AIMP1Q12904 312 aaKnown RBP5.54□□□□□ -1.52
USP48-211ENST00000526044 STRN3Q13033 797 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 MYBPC3Q14896 1274 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 ATP13A4Q4VNC1 1196 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 GLB1LQ6UWU2 654 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 LARP4Q71RC2 724 aaKnown RBP eCLIP5.54□□□□□ -1.52
USP48-211ENST00000526044 COPS6Q7L5N1 327 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 KRT26Q7Z3Y9 468 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 DEFB132Q7Z7B7 95 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 ARHGAP45Q92619 1136 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 MYL10Q9BUA6 226 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 SEC61A2Q9H9S3 476 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 EMC7Q9NPA0 242 aa5.54□□□□□ -1.52
USP48-211ENST00000526044 SAE1Q9UBE0 346 aaPredicted RBP5.54□□□□□ -1.52
USP48-211ENST00000526044 C5P01031 1676 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 NPEPPSL1A6NEC2 478 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 NEMP1O14524 444 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 RAB11FIP3O75154 756 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 APOL3O95236 402 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 CNOT4O95628 575 aaKnown RBP5.53□□□□□ -1.52
USP48-211ENST00000526044 ITGB3P05106 788 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 CPEP16870 476 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 EIF5P55010 431 aaKnown RBP5.53□□□□□ -1.52
USP48-211ENST00000526044 PCOLCEQ15113 449 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 TERF2Q15554 542 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 DGKDQ16760 1214 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 PROSER3Q2NL68 480 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 ZKSCAN2Q63HK3 967 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 SLFN13Q68D06 897 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 KIAA1841Q6NSI8 718 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 ESPNLQ6ZVH7 1005 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 G2E3Q7L622 706 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 KANSL1Q7Z3B3 1105 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 FILIP1Q7Z7B0 1213 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 STRA8Q7Z7C7 330 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 BCL6BQ8N143 479 aaPredicted RBP5.53□□□□□ -1.52
USP48-211ENST00000526044 SLC5A5Q92911 643 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 RBM15Q96T37 977 aaKnown RBP eCLIP5.53□□□□□ -1.52
USP48-211ENST00000526044 API5Q9BZZ5 524 aaKnown RBP5.53□□□□□ -1.52
USP48-211ENST00000526044 POFUT1Q9H488 388 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 TFCP2L1Q9NZI6 479 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 PPP4R1LQ9P1A2 415 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 SRRDQ9UH36 339 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 MSRAQ9UJ68 235 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 ZBTB1Q9Y2K1 713 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 VWA7Q9Y334 891 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 TAF1LQ8IZX4 1826 aa5.53□□□□□ -1.52
USP48-211ENST00000526044 LAMB4A4D0S4 1761 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 PTPRCP08575 1304 aa5.52□□□□□ -1.53
USP48-211ENST00000526044 KIF16BQ96L93 1317 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms