RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 TMEM168Q9H0V1 697 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 OR10A2Q9H208 303 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 BHMT2Q9H2M3 363 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 TDP1Q9NUW8 608 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 KLHL11Q9NVR0 708 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 GPRC5DQ9NZD1 345 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 ANAPC4Q9UJX5 808 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 PHTF1Q9UMS5 762 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 NR2E3Q9Y5X4 410 aa5.75□□□□□ -1.49
CD44-220ENST00000525688 EPB41L2O43491 1005 aaKnown RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 FRS3O43559 492 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 KRT1P04264 644 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 PI3P19957 117 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 CSF2RBP32927 897 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 GUCY1A2P33402 732 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 SARSP49591 514 aaKnown RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 ATP8B2P98198 1209 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 USP10Q14694 798 aaKnown RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 SSPNQ14714 243 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 CNN3Q15417 329 aaKnown RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 MAPRE1Q15691 268 aaKnown RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 SWSAP1Q6NVH7 229 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 SYDE1Q6ZW31 735 aaPredicted RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 PLBD2Q8NHP8 589 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 IFI44Q8TCB0 444 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 GJA10Q969M2 543 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 SLC7A6OSQ96CW6 309 aaPredicted RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 FAM84AQ96KN4 292 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 ELAC2Q9BQ52 826 aaKnown RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 INO80BQ9C086 356 aaPredicted RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 BARX1Q9HBU1 254 aaPredicted RBP5.74□□□□□ -1.49
CD44-220ENST00000525688 TLR9Q9NR96 1032 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 IQGAP2Q13576 1575 aa5.74□□□□□ -1.49
CD44-220ENST00000525688 ANP32CO43423 234 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 AMY1AP04745 511 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 VSIG10L2P0DP72 767 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 GYPEP15421 78 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 TM4SF4P48230 202 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 ADCY7P51828 1080 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 AK2P54819 239 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 PER3P56645 1201 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 RAB1AP62820 205 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 GAGE13Q4V321 117 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 ZMAT1Q5H9K5 638 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 AGBL4Q5VU57 503 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 TOGARAM2Q6ZUX3 1019 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 PQLC1Q8N2U9 271 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 CASKIN2Q8WXE0 1202 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 GCDHQ92947 438 aaPredicted RBP5.73□□□□□ -1.49
CD44-220ENST00000525688 PDCD2LQ9BRP1 358 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 SLC6A15Q9H2J7 730 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 ING3Q9NXR8 418 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 KCTD3Q9Y597 815 aa5.73□□□□□ -1.49
CD44-220ENST00000525688 FFAR3O14843 346 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 ITGA10O75578 1167 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 FOSP01100 380 aaPredicted RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 JUNP05412 331 aaKnown RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 FTH1P19P0C7X4 201 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 ZNF888P0CJ79 500 aaPredicted RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 CALRP27797 417 aaKnown RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 ALDH5A1P51649 535 aaPredicted RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 ADAM8P78325 824 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 TLE1Q04724 770 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 HGFACQ04756 655 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 NFYCQ13952 458 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 FGL2Q14314 439 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 POLD3Q15054 466 aaPredicted RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 KHDC1Q4VXA5 237 aaKnown RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 ATG14Q6ZNE5 492 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 USP30Q70CQ3 517 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 HEATR3Q7Z4Q2 680 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 MORC1Q86VD1 984 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 SPICE1Q8N0Z3 855 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 CARFQ8N187 725 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 TXNDC5Q8NBS9 432 aaKnown RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 BHLHE22Q8NFJ8 381 aaPredicted RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 CXorf38Q8TB03 319 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 LRTOMTQ8WZ04 291 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 DACT3Q96B18 629 aaPredicted RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 MBD6Q96DN6 1003 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 PPP1R16BQ96T49 567 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 C22orf23Q9BZE7 217 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 KIAA1683Q9H0B3 1180 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 NUP62CLQ9H1M0 184 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 LANCL2Q9NS86 450 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 LMBRD1Q9NUN5 540 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 CNOT6Q9ULM6 557 aaKnown RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 RBM8AQ9Y5S9 174 aaKnown RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 DISP1Q96F81 1524 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 UGGT2Q9NYU1 1516 aa5.72□□□□□ -1.49
CD44-220ENST00000525688 MYBBP1AQ9BQG0 1328 aaKnown RBP5.72□□□□□ -1.49
CD44-220ENST00000525688 PMS2P1A4D2B8 440 aa5.71□□□□□ -1.5
CD44-220ENST00000525688 LRRC14BA6NHZ5 514 aa5.71□□□□□ -1.5
CD44-220ENST00000525688 RFXAPO00287 272 aa5.71□□□□□ -1.5
CD44-220ENST00000525688 NRP1O14786 923 aa5.71□□□□□ -1.5
CD44-220ENST00000525688 ADCY6O43306 1168 aa5.71□□□□□ -1.5
CD44-220ENST00000525688 PQBP1O60828 265 aaKnown RBP5.71□□□□□ -1.5
CD44-220ENST00000525688 TOX4O94842 621 aa5.71□□□□□ -1.5
CD44-220ENST00000525688 CYP1A1P04798 512 aaPredicted RBP5.71□□□□□ -1.5
CD44-220ENST00000525688 TYRP14679 529 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms