RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 GTF2BQ00403 316 aa12.99□□□□□ -0.33
CDC27-202ENST00000525495 ZC2HC1CQ53FD0 456 aaPredicted RBP12.99□□□□□ -0.33
CDC27-202ENST00000525495 PTCRAQ6ISU1 281 aaPredicted RBP12.99□□□□□ -0.33
CDC27-202ENST00000525495 PPP1R10Q96QC0 940 aaKnown RBP12.99□□□□□ -0.33
CDC27-202ENST00000525495 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
CDC27-202ENST00000525495 IRAK3Q9Y616 596 aa12.99□□□□□ -0.33
CDC27-202ENST00000525495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.98□□□□□ -0.33
CDC27-202ENST00000525495 MCL1Q07820 350 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 NOLC1Q14978 699 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDC27-202ENST00000525495 PTPN14Q15678 1187 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 XKR4Q5GH76 650 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 LLGL2Q6P1M3 1020 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 SLC39A4Q6P5W5 647 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 ALKAL1Q6UXT8 129 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
CDC27-202ENST00000525495 DHX58Q96C10 678 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 BICD1Q96G01 975 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 B3GALT6Q96L58 329 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 ZMAT2Q96NC0 199 aaKnown RBP12.98□□□□□ -0.33
CDC27-202ENST00000525495 UHRF1Q96T88 793 aaPredicted RBP12.98□□□□□ -0.33
CDC27-202ENST00000525495 CDCA3Q99618 268 aaPredicted RBP12.98□□□□□ -0.33
CDC27-202ENST00000525495 CCDC94Q9BW85 323 aaPredicted RBP12.98□□□□□ -0.33
CDC27-202ENST00000525495 FGFBP2Q9BYJ0 223 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 GPR62Q9BZJ7 368 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 IKZF4Q9H2S9 585 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 NCOR1O75376 2440 aa12.98□□□□□ -0.33
CDC27-202ENST00000525495 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 FRMD3A2A2Y4 597 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 TISP43B9A030 160 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 CLDN3O15551 220 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 LILRB3O75022 631 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 CLASP2O75122 1294 aaKnown RBP12.97□□□□□ -0.33
CDC27-202ENST00000525495 PPP1R37O75864 691 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 KIF4AO95239 1232 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 PIGRP01833 764 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 SOD2P04179 222 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 LIG4P49917 911 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 CASP5P51878 434 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 SOX4Q06945 474 aaPredicted RBP12.97□□□□□ -0.33
CDC27-202ENST00000525495 BECN1Q14457 450 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
CDC27-202ENST00000525495 RESP18Q5W5W9 173 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 FUT10Q6P4F1 479 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 TMEM184AQ6ZMB5 413 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 ZNF720Q7Z2F6 126 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 MAP4K3Q8IVH8 894 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 HASPINQ8TF76 798 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 SNX27Q96L92 541 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 HERC2P3Q9BVR0 1158 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 COLEC11Q9BWP8 271 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 STRA6Q9BX79 667 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 ST6GALNAC4Q9H4F1 302 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 GOLGA2P5Q9HBQ8 144 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 KBTBD4Q9NVX7 518 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 TBC1D7Q9P0N9 293 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 ADAM28Q9UKQ2 775 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 HCFC2Q9Y5Z7 792 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 VWA8A3KMH1 1905 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 PLXNA3P51805 1871 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 ANKRD63C9JTQ0 380 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 C2CD2LO14523 706 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 HNRNPDLO14979 420 aaKnown RBP12.97□□□□□ -0.33
CDC27-202ENST00000525495 MBTPS2O43462 519 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 FAM189A1O60320 539 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 NR1I2O75469 434 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 IDEP14735 1019 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 SCP2P22307 547 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 TNFSF9P41273 254 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 YARSP54577 528 aaKnown RBP12.97□□□□□ -0.33
CDC27-202ENST00000525495 KCNA1Q09470 495 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 COASYQ13057 564 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 SLC10A6Q3KNW5 377 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 ZBTB41Q5SVQ8 909 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 KIAA0319Q5VV43 1072 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 TMEM130Q8N3G9 435 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 SMRP1Q8NCR6 262 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 LEO1Q8WVC0 666 aaPredicted RBP12.97□□□□□ -0.33
CDC27-202ENST00000525495 TNMDQ9H2S6 317 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 CD320Q9NPF0 282 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 TOPORSQ9NS56 1045 aaPredicted RBP12.97□□□□□ -0.33
CDC27-202ENST00000525495 CNTN3Q9P232 1028 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 CD207Q9UJ71 328 aa12.97□□□□□ -0.33
CDC27-202ENST00000525495 ANK1P16157 1881 aa12.96□□□□□ -0.33
CDC27-202ENST00000525495 POLR2DO15514 142 aaKnown RBP12.96□□□□□ -0.34
CDC27-202ENST00000525495 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.34
CDC27-202ENST00000525495 URODP06132 367 aa12.96□□□□□ -0.34
CDC27-202ENST00000525495 CNPP09543 421 aaKnown RBP12.96□□□□□ -0.34
CDC27-202ENST00000525495 CXCL8P10145 99 aa12.96□□□□□ -0.34
CDC27-202ENST00000525495 MYBP10242 640 aa12.96□□□□□ -0.34
CDC27-202ENST00000525495 KCNE1P15382 129 aa12.96□□□□□ -0.34
CDC27-202ENST00000525495 GAP43P17677 238 aa12.96□□□□□ -0.34
CDC27-202ENST00000525495 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.345e-11■□□□□ 9.1
CDC27-202ENST00000525495 CLCNKBP51801 687 aa12.96□□□□□ -0.34
CDC27-202ENST00000525495 KRT85P78386 507 aa12.96□□□□□ -0.34
CDC27-202ENST00000525495 SMAD4Q13485 552 aaKnown RBP12.96□□□□□ -0.34
CDC27-202ENST00000525495 BMS1Q14692 1282 aaKnown RBP12.96□□□□□ -0.34
CDC27-202ENST00000525495 PUS10Q3MIT2 529 aaKnown RBP12.96□□□□□ -0.34
CDC27-202ENST00000525495 SYCE2Q6PIF2 218 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms