RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 ZNF761Q86XN6 746 aaPredicted RBP5.89□□□□□ -1.47
USP47-206ENST00000525367 PQLC1Q8N2U9 271 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 NSUN6Q8TEA1 469 aaKnown RBP5.89□□□□□ -1.47
USP47-206ENST00000525367 ZNF480Q8WV37 535 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 POF1BQ8WVV4 589 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 STON2Q8WXE9 905 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 RGMAQ96B86 450 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 PGBD4Q96DM1 585 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 CLPTM1LQ96KA5 538 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 RPL10LQ96L21 214 aaKnown RBP5.89□□□□□ -1.47
USP47-206ENST00000525367 APOL5Q9BWW9 433 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 NAA15Q9BXJ9 866 aaKnown RBP5.89□□□□□ -1.47
USP47-206ENST00000525367 ARMT1Q9H993 441 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 JADE2Q9NQC1 790 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 STAP2Q9UGK3 403 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 ADAM29Q9UKF5 820 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 VWA7Q9Y334 891 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 FAM171A2A8MVW0 826 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 FAM227AF5H4B4 570 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 DAPK3O43293 454 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 PQBP1O60828 265 aaKnown RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 ITGA10O75578 1167 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 FARP2O94887 1054 aaPredicted RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 HRGP04196 525 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 PCSK1P29120 753 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 KIR2DL3P43628 341 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 ALDH5A1P51649 535 aaPredicted RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 BPIFB4P59827 614 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 FAM193AP78312 1265 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 IFIT5Q13325 482 aaKnown RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 KCNA10Q16322 511 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 RNF151Q2KHN1 245 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 SLC4A8Q2Y0W8 1093 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 MMS22LQ6ZRQ5 1243 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 REXO1L1PQ8IX06 675 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 DRC7Q8IY82 874 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 TRMT2AQ8IZ69 625 aaKnown RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 CELF5Q8N6W0 485 aaKnown RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 ANKRD53Q8N9V6 530 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 MDM1Q8TC05 714 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 ATXN2LQ8WWM7 1075 aaKnown RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 CCT6BQ92526 530 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 GCDHQ92947 438 aaPredicted RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 GFM2Q969S9 779 aaKnown RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 TMX3Q96JJ7 454 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 CCDC138Q96M89 665 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 UHRF1Q96T88 793 aaPredicted RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 VRK1Q99986 396 aaPredicted RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 OR10A2Q9H208 303 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 BHMT2Q9H2M3 363 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 GPRC5DQ9NZD1 345 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 CFAP20Q9Y6A4 193 aaKnown RBP5.88□□□□□ -1.47
USP47-206ENST00000525367 RPS6KL1Q9Y6S9 549 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 DGKBQ9Y6T7 804 aa5.88□□□□□ -1.47
USP47-206ENST00000525367 CASRP41180 1078 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 PER3P56645 1201 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 HGFACQ04756 655 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 NOGQ13253 232 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 KHDC1Q4VXA5 237 aaKnown RBP5.87□□□□□ -1.47
USP47-206ENST00000525367 C19orf54Q5BKX5 351 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 PRAMEF14Q5SWL7 426 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 RALYLQ86SE5 291 aaKnown RBP5.87□□□□□ -1.47
USP47-206ENST00000525367 KIAA0319LQ8IZA0 1049 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 KLHL36Q8N4N3 616 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 KLHDC4Q8TBB5 520 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 SLC7A6OSQ96CW6 309 aaPredicted RBP5.87□□□□□ -1.47
USP47-206ENST00000525367 MRGPRX4Q96LA9 322 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 SAMD11Q96NU1 681 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 GPHA2Q96T91 129 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 TMEM60Q9H2L4 133 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 C14orf93Q9H972 538 aaKnown RBP5.87□□□□□ -1.47
USP47-206ENST00000525367 BARX1Q9HBU1 254 aaPredicted RBP5.87□□□□□ -1.47
USP47-206ENST00000525367 ARFGAP3Q9NP61 516 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 TRMT13Q9NUP7 481 aaKnown RBP5.87□□□□□ -1.47
USP47-206ENST00000525367 TDP1Q9NUW8 608 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.87□□□□□ -1.47
USP47-206ENST00000525367 AJAP1Q9UKB5 411 aaPredicted RBP5.87□□□□□ -1.47
USP47-206ENST00000525367 STXBP5LQ9Y2K9 1186 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 LRCH1Q9Y2L9 728 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 PCDHA3Q9Y5H8 950 aa5.87□□□□□ -1.47
USP47-206ENST00000525367 ZMYM3Q14202 1370 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 MYBBP1AQ9BQG0 1328 aaKnown RBP5.86□□□□□ -1.47
USP47-206ENST00000525367 hCG_1642624A0A1W2PR95 340 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 RFXAPO00287 272 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 MATN2O00339 956 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 ENDOD1O94919 500 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 TSPAN15O95858 294 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 RENBPP51606 427 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 ADCY7P51828 1080 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 CDC42EP1Q00587 391 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 TRIM14Q14142 442 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 PUM3Q15397 648 aaKnown RBP5.86□□□□□ -1.47
USP47-206ENST00000525367 ELF2Q15723 593 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 KIAA0753Q2KHM9 967 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 ZNF385BQ569K4 471 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 DARS2Q6PI48 645 aaKnown RBP5.86□□□□□ -1.47
USP47-206ENST00000525367 CCDC174Q6PII3 467 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 USP30Q70CQ3 517 aa5.86□□□□□ -1.47
USP47-206ENST00000525367 NKAPQ8N5F7 415 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms