RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CSH1P0DML2 217 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 CSH2P0DML3 217 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 PCP11498 1178 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 IFNAR1P17181 557 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 PAMP19021 973 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 HLA-DPA1P20036 260 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 BTF3P20290 206 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 FGFR2P21802 821 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 ACSL1P33121 698 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 NNMTP40261 264 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 CCR9P51686 369 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 MAP2K6P52564 334 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 SLC5A3P53794 718 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 SNRPNP63162 240 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 PIP4K2BP78356 416 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 TESK1Q15569 626 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 ZNF174Q15697 407 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 CNGA2Q16280 664 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 SHROOM1Q2M3G4 852 aaPredicted RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 EFHC2Q5JST6 749 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 MEX3CQ5U5Q3 659 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 MCTP2Q6DN12 878 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 CYP4F22Q6NT55 531 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 INTS5Q6P9B9 1019 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 IYDQ6PHW0 289 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 C16orf59Q7L2K0 433 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 PPP1R42Q7Z4L9 355 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 SLFN11Q7Z7L1 901 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 ZER1Q7Z7L7 766 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 RTN4RL1Q86UN2 441 aaPredicted RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 PPIL6Q8IXY8 311 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 CISD2Q8N5K1 135 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 GALNT6Q8NCL4 622 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 AGBL5Q8NDL9 886 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 IPMKQ8NFU5 416 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 GABPB2Q8TAK5 448 aaPredicted RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 FBXO30Q8TB52 745 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 PANK1Q8TE04 598 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 AUTS2Q8WXX7 1259 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 MAML1Q92585 1016 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 FBXW5Q969U6 566 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 SYAP1Q96A49 352 aaPredicted RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 BICD1Q96G01 975 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 ZC3H12CQ9C0D7 883 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 MKRN2Q9H000 416 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 CRISPLD1Q9H336 500 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 SYNCQ9H7C4 482 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 ZMAT4Q9H898 229 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 RMI1Q9H9A7 625 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 EIF2B3Q9NR50 452 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 TBCCD1Q9NVR7 557 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 HCN2Q9UL51 889 aa4.93□□□□□ -1.62
CD44-213ENST00000525209 NSFL1CQ9UNZ2 370 aaKnown RBP4.93□□□□□ -1.62
CD44-213ENST00000525209 DCDC2BA2VCK2 349 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 AGAP14A8MT82 685 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 DCDC2CA8MYV0 355 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 DDX39AO00148 427 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 DVL2O14641 736 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 GJB3O75712 270 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 TSPAN9O75954 239 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 KRT37O76014 449 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 BEST1O76090 585 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 ITGA5P08648 1049 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 CSF1P09603 554 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 BMP4P12644 408 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 MTHFD2P13995 350 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 GAP43P17677 238 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 FGFR4P22455 802 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 FGFR3P22607 806 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 CST5P28325 142 aaPredicted RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 MLH1P40692 756 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 MAP2K3P46734 347 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 SEC24CP53992 1094 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 ZNF445P59923 1031 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 ST5P78524 1137 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 MRPS9P82933 396 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 HTRA4P83105 476 aaPredicted RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 LACTBP83111 547 aaPredicted RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 ADCY2Q08462 1091 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 MAP3K12Q12852 859 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 LRMPQ12912 555 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 CHAF1BQ13112 559 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 FGL2Q14314 439 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 COG2Q14746 738 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 SUZ12Q15022 739 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 TARBP2Q15633 366 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 ADIPOQQ15848 244 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 TMEM266Q2M3C6 531 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 ZNF674Q2M3X9 581 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 MUM1Q2TAK8 710 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 PAN2Q504Q3 1202 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 MBNL2Q5VZF2 373 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 WDR73Q6P4I2 378 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 DHX32Q7L7V1 743 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 R3HCC1LQ7Z5L2 792 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 MRPL41Q8IXM3 137 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 TMCO5AQ8N6Q1 288 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 FANCBQ8NB91 859 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 CYP2W1Q8TAV3 490 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 BAHD1Q8TBE0 780 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms