RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ARMCX6Q7L4S7 300 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 NIPA1Q7RTP0 329 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 FMR1NBQ8N0W7 255 aaPredicted RBP18.13■□□□□ 0.49
BEST1-203ENST00000524877 ARHGAP18Q8N392 663 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 TTC25Q96NG3 672 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 NRXN3Q9Y4C0 1643 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 ZC3H4Q9UPT8 1303 aaKnown RBP18.13■□□□□ 0.49
BEST1-203ENST00000524877 ZC3H11AO75152 810 aaKnown RBP eCLIP18.13■□□□□ 0.49
BEST1-203ENST00000524877 CYP4A22Q5TCH4 519 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 PCDHA13Q9Y5I0 950 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 TBKBP1A7MCY6 615 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 YWHAGP61981 247 aaKnown RBP eCLIP18.12■□□□□ 0.49
BEST1-203ENST00000524877 TAP1Q03518 808 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 FAF1Q9UNN5 650 aaPredicted RBP18.12■□□□□ 0.49
BEST1-203ENST00000524877 HPS5Q9UPZ3 1129 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 RSPH10B2B2RC85 870 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 RSPH10BP0C881 870 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 CACNB2Q08289 660 aaPredicted RBP18.12■□□□□ 0.49
BEST1-203ENST00000524877 CLMNQ96JQ2 1002 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 TRPV2Q9Y5S1 764 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 SLC37A4O43826 429 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 HMGCRP04035 888 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 MYBP10242 640 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 C11orf70Q9BRQ4 267 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 CARD6Q9BX69 1037 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 SPDYE5A6NIY4 337 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 PPFIA4O75335 1185 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 EGFRP00533 1210 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 PRKAR2AP13861 404 aaKnown RBP18.12■□□□□ 0.49
BEST1-203ENST00000524877 SNCBQ16143 134 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 TDRD10Q5VZ19 366 aaKnown RBP18.12■□□□□ 0.49
BEST1-203ENST00000524877 PGBD3Q8N328 593 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 MED15Q96RN5 788 aa18.12■□□□□ 0.49
BEST1-203ENST00000524877 MRPL9Q9BYD2 267 aaKnown RBP18.12■□□□□ 0.49
BEST1-203ENST00000524877 PPFIA2O75334 1257 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 SAT1P21673 171 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 IKBKEQ14164 716 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 RBM41Q96IZ5 413 aaKnown RBP18.11■□□□□ 0.49
BEST1-203ENST00000524877 IL17RBQ9NRM6 502 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 KLK14Q9P0G3 267 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 IP6K2Q9UHH9 426 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 TBX20Q9UMR3 447 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 DRAP1Q14919 205 aaPredicted RBP18.11■□□□□ 0.49
BEST1-203ENST00000524877 SLMAPQ14BN4 828 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 FAM102AQ5T9C2 384 aaPredicted RBP18.11■□□□□ 0.49
BEST1-203ENST00000524877 SPRYD7Q5W111 196 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 ALKBH5Q6P6C2 394 aaKnown RBP18.11■□□□□ 0.49
BEST1-203ENST00000524877 DPP3Q9NY33 737 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 SUFUQ9UMX1 484 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 PCDHAC2Q9Y5I4 1007 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 HSPA6P17066 643 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 LIG3P49916 1009 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 GPC5P78333 572 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 MPZL3Q6UWV2 235 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 RNF10Q8N5U6 811 aaKnown RBP18.11■□□□□ 0.49
BEST1-203ENST00000524877 ABTB1Q969K4 478 aaPredicted RBP18.11■□□□□ 0.49
BEST1-203ENST00000524877 DSEQ9UL01 958 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 PTPN22Q9Y2R2 807 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 H3BRJ5 948 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 TOMM70O94826 608 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 SULT1E1P49888 294 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 TFDP2Q14188 446 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 VSTM4Q8IW00 320 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 LRRC8AQ8IWT6 810 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 DNAJB3Q8WWF6 145 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 MAGOHBQ96A72 148 aaKnown RBP18.11■□□□□ 0.49
BEST1-203ENST00000524877 PDGFRBP09619 1106 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 ELF2Q15723 593 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 MKL1Q969V6 931 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 ANAPC7Q9UJX3 599 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 FNDC3AQ9Y2H6 1198 aaKnown RBP18.11■□□□□ 0.49
BEST1-203ENST00000524877 ANGPTL3Q9Y5C1 460 aa18.11■□□□□ 0.49
BEST1-203ENST00000524877 INSRRP14616 1297 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 ELAVL2Q12926 359 aaKnown RBP18.1■□□□□ 0.49
BEST1-203ENST00000524877 BTG3Q14201 252 aaPredicted RBP18.1■□□□□ 0.49
BEST1-203ENST00000524877 GRIK5Q16478 980 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 SYT2Q8N9I0 419 aaPredicted RBP18.1■□□□□ 0.49
BEST1-203ENST00000524877 A1CFQ9NQ94 594 aaKnown RBP18.1■□□□□ 0.49
BEST1-203ENST00000524877 YDJCA8MPS7 323 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 IRF1P10914 325 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 NECAB2Q7Z6G3 386 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 SLAIN1Q8ND83 568 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 PBKQ96KB5 322 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 FAN1Q9Y2M0 1017 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 TJP3O95049 919 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 GNL1P36915 607 aaPredicted RBP18.1■□□□□ 0.49
BEST1-203ENST00000524877 RWDD2BP57060 319 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 NAA35Q5VZE5 725 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 RAB44Q7Z6P3 723 aaPredicted RBP18.1■□□□□ 0.49
BEST1-203ENST00000524877 PPP4R1Q8TF05 950 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 EMILIN2Q9BXX0 1053 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 PRMT2P55345 433 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 IRX1P78414 480 aaPredicted RBP18.1■□□□□ 0.49
BEST1-203ENST00000524877 CNTN2Q02246 1040 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 SPATS2Q86XZ4 545 aaKnown RBP18.1■□□□□ 0.49
BEST1-203ENST00000524877 C4orf19Q8IY42 314 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 REPS2Q8NFH8 660 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 NT5C1AQ9BXI3 368 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 PCDHB8Q9UN66 801 aa18.1■□□□□ 0.49
BEST1-203ENST00000524877 ZNF189O75820 626 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms