RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PHC1P78364 1004 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 CCDC178Q5BJE1 867 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 GPR158Q5T848 1215 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 LAIR1Q6GTX8 287 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 LRRC55Q6ZSA7 311 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 ESPNLQ6ZVH7 1005 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 LRRTM3Q86VH5 581 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 ZNF575Q86XF7 245 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 PRAM1Q96QH2 718 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 TTPALQ9BTX7 342 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 H2AFY2Q9P0M6 372 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-208ENST00000524652 FZD1Q9UP38 647 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 MST1RQ04912 1400 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 FAM83GA6ND36 823 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 ELL2O00472 640 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-208ENST00000524652 TRIM24O15164 1050 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 HOXA3O43365 443 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-208ENST00000524652 KPNA6O60684 536 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 PPFIA2O75334 1257 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 STC2O76061 302 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 RECQL4O94761 1208 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 ALDH1A2O94788 518 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 SEC24DO94855 1032 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-208ENST00000524652 PCDH8O95206 1070 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 ITGB1P05556 798 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 PFKMP08237 780 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 HSPA5P11021 654 aaKnown RBP4.06□□□□□ -1.76
CSDE1-208ENST00000524652 YY1P25490 414 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 NEK4P51957 841 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 COL10A1Q03692 680 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 HOMER1Q86YM7 354 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 DNAJC10Q8IXB1 793 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 GLB1L3Q8NCI6 653 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-208ENST00000524652 PIK3C3Q8NEB9 887 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 UBXN4Q92575 508 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 FERMT2Q96AC1 680 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 ZG16BQ96DA0 208 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 TESK2Q96S53 571 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.06□□□□□ -1.76
CSDE1-208ENST00000524652 ING3Q9NXR8 418 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 MSRAQ9UJ68 235 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 KIF20BQ96Q89 1820 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 PHLPP1O60346 1717 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 ABCA3Q99758 1704 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 KIF1AQ12756 1690 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 ALS2Q96Q42 1657 aa4.06□□□□□ -1.76
CSDE1-208ENST00000524652 CD163L1Q9NR16 1453 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 NCOA3Q9Y6Q9 1424 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 SBNO2Q9Y2G9 1366 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 CENPJQ9HC77 1338 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-208ENST00000524652 ZNF891A8MT65 544 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-208ENST00000524652 TGM5O43548 720 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 NRP2O60462 931 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 RHOBTB3O94955 611 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 LY86O95711 162 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 GYPEP15421 78 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 HK1P19367 917 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 KPNA1P52294 538 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-208ENST00000524652 OCRLQ01968 901 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 CD69Q07108 199 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 CCDC144BQ3MJ40 725 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 LY6G5CQ5SRR4 150 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 ZBTB41Q5SVQ8 909 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 IQSEC1Q6DN90 963 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 DOK3Q7L591 496 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 PPM1KQ8N3J5 372 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 SMC1BQ8NDV3 1235 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 CHTF18Q8WVB6 975 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 NINJ1Q92982 152 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 ZNF496Q96IT1 587 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-208ENST00000524652 CRAMP1Q96RY5 1269 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 CPPED1Q9BRF8 314 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-208ENST00000524652 THG1LQ9NWX6 298 aaKnown RBP4.05□□□□□ -1.76
CSDE1-208ENST00000524652 CD2APQ9Y5K6 639 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 HS3ST4Q9Y661 456 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 COL16A1Q07092 1604 aaPredicted RBP4.05□□□□□ -1.76
CSDE1-208ENST00000524652 C1orf167Q5SNV9 1468 aa4.05□□□□□ -1.76
CSDE1-208ENST00000524652 DCCP43146 1447 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 ANKRD26Q9UPS8 1709 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 PIK3C2AO00443 1686 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 USP54Q70EL1 1684 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 DNAJC6O75061 913 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 ABHD16AO95870 558 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 NR4A1P22736 598 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 XPAP23025 273 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-208ENST00000524652 FAM214AQ32MH5 1076 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 PLEKHG4Q58EX7 1191 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 C16orf86Q6ZW13 317 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 FAM83AQ86UY5 434 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 NXPE1Q8N323 547 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 ZNF610Q8N9Z0 462 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 OR52N2Q8NGI0 321 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 OR5M3Q8NGP4 307 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 PROKR1Q8TCW9 393 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 GAB3Q8WWW8 586 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 APPBP2Q92624 585 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 IL17RAQ96F46 866 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 RNPC3Q96LT9 517 aaKnown RBP4.04□□□□□ -1.76
CSDE1-208ENST00000524652 DRC1Q96MC2 740 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 FDXACB1Q9BRP7 624 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms