RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 DARS2Q6PI48 645 aaKnown RBP7.3□□□□□ -1.24
SKP1-213ENST00000524288 MORC1Q86VD1 984 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 KIAA0319LQ8IZA0 1049 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 SH2D3CQ8N5H7 860 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 VPS37AQ8NEZ2 397 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.3□□□□□ -1.24
SKP1-213ENST00000524288 Q8TCH9 128 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 SNX33Q8WV41 574 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 HOXB13Q92826 284 aaPredicted RBP7.3□□□□□ -1.24
SKP1-213ENST00000524288 CLPTM1LQ96KA5 538 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 WWC2-AS2Q96NR7 200 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 UHRF1Q96T88 793 aaPredicted RBP7.3□□□□□ -1.24
SKP1-213ENST00000524288 VRK1Q99986 396 aaPredicted RBP7.3□□□□□ -1.24
SKP1-213ENST00000524288 ELAC2Q9BQ52 826 aaKnown RBP7.3□□□□□ -1.24
SKP1-213ENST00000524288 PDCD2LQ9BRP1 358 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 TDP1Q9NUW8 608 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 PCDHA3Q9Y5H8 950 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 CFAP20Q9Y6A4 193 aaKnown RBP7.3□□□□□ -1.24
SKP1-213ENST00000524288 CAPN8A6NHC0 703 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 PEX2P28328 305 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 RAC3P60763 192 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 FAM193AP78312 1265 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 EIF4HQ15056 248 aaKnown RBP7.29□□□□□ -1.24
SKP1-213ENST00000524288 ANO6Q4KMQ2 910 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 RNF220Q5VTB9 566 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 PPP4R3AQ6IN85 833 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 ZNF585AQ6P3V2 769 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 FAM180AQ6UWF9 173 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 RSPH3Q86UC2 560 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 FAM43AQ8N2R8 423 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 NEIL1Q96FI4 390 aaPredicted RBP7.29□□□□□ -1.24
SKP1-213ENST00000524288 TMX3Q96JJ7 454 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 OSBPL6Q9BZF3 934 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 ING3Q9NXR8 418 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 SRRDQ9UH36 339 aa7.29□□□□□ -1.24
SKP1-213ENST00000524288 RBM8AQ9Y5S9 174 aaKnown RBP7.29□□□□□ -1.24
SKP1-213ENST00000524288 CFAP69A5D8W1 941 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 DAPK3O43293 454 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 ZNF888P0CJ79 500 aaPredicted RBP7.28□□□□□ -1.24
SKP1-213ENST00000524288 NOGQ13253 232 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 SEMA5AQ13591 1074 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 SAFB2Q14151 953 aaKnown RBP eCLIP7.28□□□□□ -1.24
SKP1-213ENST00000524288 PCOLCEQ15113 449 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 MAN2A1Q16706 1144 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 MST1LQ2TV78 715 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 SPRED1Q7Z699 444 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 SRLQ86TD4 932 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 TTC7BQ86TV6 843 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 SMC5Q8IY18 1101 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 UNC5BQ8IZJ1 945 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 SPICE1Q8N0Z3 855 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 PQLC1Q8N2U9 271 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 ZGPATQ8N5A5 531 aaKnown RBP7.28□□□□□ -1.24
SKP1-213ENST00000524288 REPS2Q8NFH8 660 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 NSUN6Q8TEA1 469 aaKnown RBP7.28□□□□□ -1.24
SKP1-213ENST00000524288 FBXO41Q8TF61 875 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 TBCBQ99426 244 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 FNIP2Q9P278 1114 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.28□□□□□ -1.24
SKP1-213ENST00000524288 L1RE1Q9UN81 338 aa7.28□□□□□ -1.24
SKP1-213ENST00000524288 C2orf78A6NCI8 922 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 H3BUI4 141 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 ALDH1A2O94788 518 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 ENDOD1O94919 500 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 TACR2P21452 398 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 MRE11P49959 708 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 MEOX1P50221 254 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 AGFG1P52594 562 aaKnown RBP7.27□□□□□ -1.25
SKP1-213ENST00000524288 RAB1AP62820 205 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 CDC42EP1Q00587 391 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 MEF2AQ02078 507 aaPredicted RBP7.27□□□□□ -1.25
SKP1-213ENST00000524288 KHDC1Q4VXA5 237 aaKnown RBP7.27□□□□□ -1.25
SKP1-213ENST00000524288 TCTN3Q6NUS6 607 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 XRRA1Q6P2D8 792 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 TAS1R1Q7RTX1 841 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 GIMAP8Q8ND71 665 aaPredicted RBP7.27□□□□□ -1.25
SKP1-213ENST00000524288 ZNF480Q8WV37 535 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 STON2Q8WXE9 905 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 LRTOMTQ8WZ04 291 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 PAWRQ96IZ0 340 aaKnown RBP7.27□□□□□ -1.25
SKP1-213ENST00000524288 TNIP3Q96KP6 325 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 LRRC37BQ96QE4 947 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 DMRTA2Q96SC8 542 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 ZMAT3Q9HA38 289 aaKnown RBP7.27□□□□□ -1.25
SKP1-213ENST00000524288 LMBRD1Q9NUN5 540 aa7.27□□□□□ -1.25
SKP1-213ENST00000524288 PUF60Q9UHX1 559 aaKnown RBP7.27□□□□□ -1.25
SKP1-213ENST00000524288 GOLIM4O00461 696 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 FOXS1O43638 330 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 AKAP8O43823 692 aaKnown RBP7.26□□□□□ -1.25
SKP1-213ENST00000524288 HRGP04196 525 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 C6P13671 934 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 SREBF1P36956 1147 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 NFYCQ13952 458 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 CRIP3Q6Q6R5 217 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 MAEAQ7L5Y9 396 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 HEATR3Q7Z4Q2 680 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 CLEC14AQ86T13 490 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 CELF5Q8N6W0 485 aaKnown RBP7.26□□□□□ -1.25
SKP1-213ENST00000524288 SLC35A4Q96G79 324 aa7.26□□□□□ -1.25
SKP1-213ENST00000524288 CDK5RAP3Q96JB5 506 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms