RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CLCA2Q9UQC9 943 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 RUVBL1Q9Y265 456 aaKnown RBP4.92□□□□□ -1.62
SKP1-212ENST00000523966 ACTL7AQ9Y615 435 aa4.92□□□□□ -1.62
SKP1-212ENST00000523966 B5MCH6 92 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 MGEA5O60502 916 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 ZBED1O96006 694 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 AMY1AP04745 511 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 SNRPA1P09661 255 aaKnown RBP4.91□□□□□ -1.62
SKP1-212ENST00000523966 FTH1P19P0C7X4 201 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 TRIM27P14373 513 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 MALP21145 153 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 FAM193AP78312 1265 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 TARDBPQ13148 414 aaKnown RBP eCLIP4.91□□□□□ -1.62
SKP1-212ENST00000523966 MTM1Q13496 603 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 BRD3Q15059 726 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 SAFBQ15424 915 aaKnown RBP eCLIP4.91□□□□□ -1.62
SKP1-212ENST00000523966 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 MAP9Q49MG5 647 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 AFMIDQ63HM1 303 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 NPNTQ6UXI9 565 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 CHST15Q7LFX5 561 aaPredicted RBP4.91□□□□□ -1.62
SKP1-212ENST00000523966 OVCH2Q7RTZ1 564 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 FRMD5Q7Z6J6 570 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 C11orf96Q7Z7L8 435 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 GSPT2Q8IYD1 628 aaKnown RBP4.91□□□□□ -1.62
SKP1-212ENST00000523966 LILRA3Q8N6C8 439 aaPredicted RBP4.91□□□□□ -1.62
SKP1-212ENST00000523966 NLGN4YQ8NFZ3 816 aaPredicted RBP4.91□□□□□ -1.62
SKP1-212ENST00000523966 IFI44Q8TCB0 444 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 MRGPRX4Q96LA9 322 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 ZNF512Q96ME7 567 aaPredicted RBP4.91□□□□□ -1.62
SKP1-212ENST00000523966 MPHOSPH9Q99550 1183 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 CPPED1Q9BRF8 314 aaPredicted RBP4.91□□□□□ -1.62
SKP1-212ENST00000523966 MRI1Q9BV20 369 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 PLA2G12BQ9BX93 195 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 B3GNT5Q9BYG0 378 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 C11orf54Q9H0W9 315 aaPredicted RBP4.91□□□□□ -1.62
SKP1-212ENST00000523966 SPON1Q9HCB6 807 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 PLA2G3Q9NZ20 509 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 USP25Q9UHP3 1055 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 FAM50BQ9Y247 325 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 ZMYM3Q14202 1370 aa4.91□□□□□ -1.62
SKP1-212ENST00000523966 A0A1W2PPL8 197 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 CFAP69A5D8W1 941 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 LRRC14BA6NHZ5 514 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 MATN2O00339 956 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 GOLIM4O00461 696 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 TPP1O14773 563 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 KIAA0391O15091 583 aaKnown RBP4.9□□□□□ -1.63
SKP1-212ENST00000523966 IPO13O94829 963 aaKnown RBP4.9□□□□□ -1.63
SKP1-212ENST00000523966 GNAI3P08754 354 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 ALAS1P13196 640 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 PHKG2P15735 406 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 ALOX15P16050 662 aaPredicted RBP4.9□□□□□ -1.63
SKP1-212ENST00000523966 RHCEP18577 417 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 GUCY1A2P33402 732 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 ZNF280AP59817 542 aaPredicted RBP4.9□□□□□ -1.63
SKP1-212ENST00000523966 GNAI1P63096 354 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 ADAM8P78325 824 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 RHDQ02161 417 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 TLE1Q04724 770 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 SAFB2Q14151 953 aaKnown RBP eCLIP4.9□□□□□ -1.63
SKP1-212ENST00000523966 FLYWCH1Q4VC44 716 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 RNF220Q5VTB9 566 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 EFCAB12Q6NXP0 572 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 CIR1Q86X95 450 aaPredicted RBP4.9□□□□□ -1.63
SKP1-212ENST00000523966 GPR135Q8IZ08 494 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 D2HGDHQ8N465 521 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 ZGPATQ8N5A5 531 aaKnown RBP4.9□□□□□ -1.63
SKP1-212ENST00000523966 FAM156AQ8NDB6 213 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 PJA1Q8NG27 643 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 ZFP28Q8NHY6 868 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 BRIX1Q8TDN6 353 aaKnown RBP4.9□□□□□ -1.63
SKP1-212ENST00000523966 SLC35A4Q96G79 324 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 SAMD11Q96NU1 681 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 GNRHR2Q96P88 292 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 POGKQ9P215 609 aa4.9□□□□□ -1.63
SKP1-212ENST00000523966 A0A088AWK7 358 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 OTOL1A6NHN0 477 aaPredicted RBP4.89□□□□□ -1.63
SKP1-212ENST00000523966 PJA2O43164 708 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 MAP4K4O95819 1239 aaPredicted RBP4.89□□□□□ -1.63
SKP1-212ENST00000523966 PLATP00750 562 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 POMCP01189 267 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 AMHP03971 560 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 HRGP04196 525 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 INHBBP09529 407 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 TYRP14679 529 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 FPR1P21462 350 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 PCSK1P29120 753 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 ALDH1A3P47895 512 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 CLRN1P58418 232 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 RAP2BP61225 183 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 ATP8B2P98198 1209 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 SNAPC2Q13487 334 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 CNN3Q15417 329 aaKnown RBP4.89□□□□□ -1.63
SKP1-212ENST00000523966 PABPC1LQ4VXU2 614 aaKnown RBP4.89□□□□□ -1.63
SKP1-212ENST00000523966 HS1BP3Q53T59 392 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 KHDC1LQ5JSQ8 128 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 MFSD14BQ5SR56 506 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 ERICH6BQ5W0A0 696 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 OTUD7BQ6GQQ9 843 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms