RNA–Protein interactions for RNA: ENST00000523675.1

PTK2-248, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-248ENST00000523675 ZNF280BQ86YH2 543 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 SUGP1Q8IWZ8 645 aaKnown RBP9.37□□□□□ -0.91
PTK2-248ENST00000523675 DIS3L2Q8IYB7 885 aaKnown RBP9.37□□□□□ -0.91
PTK2-248ENST00000523675 FBXL6Q8N531 539 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 NECAB1Q8N987 351 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 HDAC7Q8WUI4 952 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 LRRN4Q8WUT4 740 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 PRIMPOLQ96LW4 560 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 FBXL18Q96ME1 805 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 FAM117AQ9C073 453 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 CSRNP2Q9H175 543 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 TUFT1Q9NNX1 390 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 XPNPEP1Q9NQW7 623 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 MRPL17Q9NRX2 175 aaKnown RBP9.37□□□□□ -0.91
PTK2-248ENST00000523675 DNAJB4Q9UDY4 337 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 DBR1Q9UK59 544 aaKnown RBP9.37□□□□□ -0.91
PTK2-248ENST00000523675 INPP5FQ9Y2H2 1132 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 GIT1Q9Y2X7 761 aa9.37□□□□□ -0.91
PTK2-248ENST00000523675 A0A1B0GUA9 196 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 MEIS3P2A8K0S8 358 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 NRP1O14786 923 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 ZBTB39O15060 712 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 DDHD2O94830 711 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 PAPLNO95428 1278 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 SOD2P04179 222 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 TXKP42681 527 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 NHLH1Q02575 133 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 MBTD1Q05BQ5 628 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 DSC1Q08554 894 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 MTMR3Q13615 1198 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 GPR149Q86SP6 731 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 CABP7Q86V35 215 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 COLGALT2Q8IYK4 626 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 RNF168Q8IYW5 571 aaPredicted RBP9.36□□□□□ -0.91
PTK2-248ENST00000523675 SMG8Q8ND04 991 aaKnown RBP9.36□□□□□ -0.91
PTK2-248ENST00000523675 MCPH1Q8NEM0 835 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 CMASQ8NFW8 434 aaPredicted RBP9.36□□□□□ -0.91
PTK2-248ENST00000523675 ASIC4Q96FT7 647 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 CCDC43Q96MW1 224 aaKnown RBP9.36□□□□□ -0.91
PTK2-248ENST00000523675 KLHL5Q96PQ7 755 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 NACC1Q96RE7 527 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 POLR3CQ9BUI4 534 aaPredicted RBP9.36□□□□□ -0.91
PTK2-248ENST00000523675 COLEC11Q9BWP8 271 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 SFXN1Q9H9B4 322 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 LIMCH1Q9UPQ0 1083 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 SORCS3Q9UPU3 1222 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 IPPQ9Y573 584 aa9.36□□□□□ -0.91
PTK2-248ENST00000523675 INO80B-WBP1J3KQ70 363 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 POMCP01189 267 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 SPATA31C1P0DKV0 1188 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 ARF4P18085 180 aaPredicted RBP9.35□□□□□ -0.91
PTK2-248ENST00000523675 GLRA2P23416 452 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 KLRC2P26717 231 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 RPA1P27694 616 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 TRAPPC10P48553 1259 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 CLCN4P51793 760 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 CREMQ03060 361 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 CAPSQ13938 189 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 FAM187BQ17R55 369 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 SLC27A1Q6PCB7 646 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 CATSPER3Q86XQ3 398 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 MEIOBQ8N635 442 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 ERMNQ8TAM6 284 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 BCL7CQ8WUZ0 217 aaPredicted RBP9.35□□□□□ -0.91
PTK2-248ENST00000523675 ACSF2Q96CM8 615 aaPredicted RBP9.35□□□□□ -0.91
PTK2-248ENST00000523675 RPS6KC1Q96S38 1066 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 VN1R3Q9BXE9 311 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 TRIM6Q9C030 488 aaPredicted RBP9.35□□□□□ -0.91
PTK2-248ENST00000523675 GBP3Q9H0R5 595 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 FOXP1Q9H334 677 aaPredicted RBP9.35□□□□□ -0.91
PTK2-248ENST00000523675 POMKQ9H5K3 350 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 RXFP1Q9HBX9 757 aa9.35□□□□□ -0.91
PTK2-248ENST00000523675 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTK2-248ENST00000523675 PRMT7Q9NVM4 692 aaPredicted RBP9.35□□□□□ -0.91
PTK2-248ENST00000523675 ZDBF2Q9HCK1 2354 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 LARGE1O95461 756 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 URODP06132 367 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 ADH1AP07327 375 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 CNPP09543 421 aaKnown RBP9.34□□□□□ -0.91
PTK2-248ENST00000523675 EPCAMP16422 314 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
PTK2-248ENST00000523675 CA8P35219 290 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.91
PTK2-248ENST00000523675 AFF1P51825 1210 aaKnown RBP9.34□□□□□ -0.91
PTK2-248ENST00000523675 HMGN5P82970 282 aaKnown RBP9.34□□□□□ -0.91
PTK2-248ENST00000523675 PDIA5Q14554 519 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 LONRF3Q496Y0 759 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 KIAA0319Q5VV43 1072 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 CDCA2Q69YH5 1023 aaPredicted RBP9.34□□□□□ -0.91
PTK2-248ENST00000523675 OTOP3Q7RTS5 596 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 ZBTB33Q86T24 672 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.91
PTK2-248ENST00000523675 KREMEN2Q8NCW0 462 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 FBXO18Q8NFZ0 1043 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 ZSCAN31Q96LW9 406 aaPredicted RBP9.34□□□□□ -0.91
PTK2-248ENST00000523675 GAD1Q99259 594 aa9.34□□□□□ -0.91
PTK2-248ENST00000523675 HERC2P3Q9BVR0 1158 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms