RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 RHOBTB2Q9BYZ6 727 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 CSRNP2Q9H175 543 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 SPON1Q9HCB6 807 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 MOCS1Q9NZB8 636 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 SLC23A1Q9UHI7 598 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 CLCA2Q9UQC9 943 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 MYRFQ9Y2G1 1151 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 PCDHB1Q9Y5F3 818 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 MYBBP1AQ9BQG0 1328 aaKnown RBP7.17□□□□□ -1.26
CPNE3-207ENST00000523588 SGTAO43765 313 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 SNRPA1P09661 255 aaKnown RBP7.16□□□□□ -1.26
CPNE3-207ENST00000523588 DDCP20711 480 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 EPHB1P54762 984 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 CLRN1P58418 232 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 CDC42EP1Q00587 391 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 DSC2Q02487 901 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 TOB2Q14106 344 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-207ENST00000523588 NRN1LQ496H8 165 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 PRR18Q8N4B5 295 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 RNF169Q8NCN4 708 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 TFAP2CQ92754 450 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 KAT5Q92993 513 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 DMRTA2Q96SC8 542 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 TDP1Q9NUW8 608 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-207ENST00000523588 ANKRD6Q9Y2G4 727 aa7.16□□□□□ -1.26
CPNE3-207ENST00000523588 IL33O95760 270 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 C1SP09871 688 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 RAP2AP10114 183 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 PDCP20941 246 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 ZXDCQ2QGD7 858 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-207ENST00000523588 RRP12Q5JTH9 1297 aaKnown RBP7.15□□□□□ -1.26
CPNE3-207ENST00000523588 SEM1Q6ZVN7 128 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 GGNQ86UU5 652 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 OR10H5Q8NGA6 315 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 IFI44Q8TCB0 444 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 MRGPRX4Q96LA9 322 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 NUP88Q99567 741 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-207ENST00000523588 MYOCQ99972 504 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 NDC1Q9BTX1 674 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 FAM30AQ9NZY2 134 aa7.15□□□□□ -1.26
CPNE3-207ENST00000523588 E2F8A0AVK6 867 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 LEFTY2O00292 366 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 MATN3O15232 486 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 TEX33O43247 280 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 S100BP04271 92 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-207ENST00000523588 POU2F2P09086 479 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 PF4V1P10720 104 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 ZSCAN20P17040 1043 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-207ENST00000523588 ATP5JP18859 108 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 CTXN1P60606 82 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 FOXE3Q13461 319 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 ATXN7L2Q5T6C5 722 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-207ENST00000523588 METRNLQ641Q3 311 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 EFCAB12Q6NXP0 572 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 DCBLD1Q8N8Z6 715 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 ZFP28Q8NHY6 868 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 NSUN6Q8TEA1 469 aaKnown RBP7.14□□□□□ -1.27
CPNE3-207ENST00000523588 CACTINQ8WUQ7 758 aaKnown RBP7.14□□□□□ -1.27
CPNE3-207ENST00000523588 ZNF503Q96F45 646 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 CAMKK2Q96RR4 588 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 CDH19Q9H159 772 aa7.14□□□□□ -1.27
CPNE3-207ENST00000523588 CFAP20Q9Y6A4 193 aaKnown RBP7.14□□□□□ -1.27
CPNE3-207ENST00000523588 TNFRSF1AP19438 455 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 AKAP5P24588 427 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 FXR1P51114 621 aaKnown RBP eCLIP7.13□□□□□ -1.27
CPNE3-207ENST00000523588 DGCR2P98153 550 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 SLC25A3Q00325 362 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 RABL3Q5HYI8 236 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 MIIPQ5JXC2 388 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 PPP4R3AQ6IN85 833 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 PLXDC1Q8IUK5 500 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 JPH3Q8WXH2 748 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-207ENST00000523588 TMX3Q96JJ7 454 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 ZNF180Q9UJW8 692 aa7.13□□□□□ -1.27
CPNE3-207ENST00000523588 RUVBL1Q9Y265 456 aaKnown RBP7.13□□□□□ -1.27
CPNE3-207ENST00000523588 DRGXA6NNA5 263 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 VCAM1P19320 739 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 MGAT1P26572 445 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 APOBEC3AP31941 199 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-207ENST00000523588 RAP2BP61225 183 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 PUM1Q14671 1186 aaKnown RBP eCLIP7.12□□□□□ -1.27
CPNE3-207ENST00000523588 USP45Q70EL2 814 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 CATIPQ7Z7H3 387 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 CLPTM1LQ96KA5 538 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 ZNF747Q9BV97 191 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 GTPBP4Q9BZE4 634 aaKnown RBP7.12□□□□□ -1.27
CPNE3-207ENST00000523588 ZIM2Q9NZV7 527 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 POGKQ9P215 609 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 SORCS3Q9UPU3 1222 aa7.12□□□□□ -1.27
CPNE3-207ENST00000523588 TRIM24O15164 1050 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 AMHP03971 560 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 ZNF280AP59817 542 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-207ENST00000523588 NHLH2Q02577 135 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 TLE1Q04724 770 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 DACT2Q5SW24 774 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 FAM102AQ5T9C2 384 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-207ENST00000523588 ZNF529Q6P280 563 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 TTC7BQ86TV6 843 aa7.11□□□□□ -1.27
CPNE3-207ENST00000523588 RSPH3Q86UC2 560 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms