RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF2-204	ENST00000522539	PSMD5	Q16401	504 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	PPM1L	Q5SGD2	360 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	LIN9	Q5TKA1	542 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	FAM171A1	Q5VUB5	890 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	PDXDC1	Q6P996	788 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	CPLX2	Q6PUV4	134 aa	Known RBP	13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	NPAS3	Q8IXF0	933 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	ITFG1	Q8TB96	612 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	TM6SF1	Q9BZW5	370 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	EPC1	Q9H2F5	836 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	FZD8	Q9H461	694 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	KCNH3	Q9ULD8	1083 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	CYP46A1	Q9Y6A2	500 aa		13.63	□□□□□ -0.23
BRF2-204	ENST00000522539	FAM170B	A6NMN3	283 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	CCL16	O15467	120 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	LAMTOR5	O43504	91 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	XYLB	O75191	536 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	XRCC6	P12956	609 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	TGM1	P22735	817 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	RPS9	P46781	194 aa	Known RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	SCRN1	Q12765	414 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	ELAVL2	Q12926	359 aa	Known RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	FZD5	Q13467	585 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	GPR161	Q8N6U8	529 aa	Known RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	TNFRSF25	Q93038	417 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	NELL2	Q99435	816 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	CXCL16	Q9H2A7	254 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	AVEN	Q9NQS1	362 aa	Predicted RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	GJB4	Q9NTQ9	266 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	DNMT3B	Q9UBC3	853 aa	Known RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	PARP2	Q9UGN5	583 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	RBM19	Q9Y4C8	960 aa	Known RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	VWA8	A3KMH1	1905 aa		13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.62	□□□□□ -0.23
BRF2-204	ENST00000522539	FAM205C	A6NFA0	338 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	CASTOR2	A6NHX0	329 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	TTLL13P	A6NNM8	815 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	TMEM189-UBE2V1	I3L0A0	370 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	ECI2	O75521	394 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	BAG4	O95429	457 aa	Known RBP	13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	TH	P07101	528 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	SDHB	P21912	280 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	FGFR3	P22607	806 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	RBM25	P49756	843 aa	Known RBP	13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	STK3	Q13188	491 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	POTEH	Q6S545	545 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	MAMSTR	Q6ZN01	415 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	ZNF687	Q8N1G0	1237 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	SLC7A14	Q8TBB6	771 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	HASPIN	Q8TF76	798 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	LARP6	Q9BRS8	491 aa	Known RBP	13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	PRMT8	Q9NR22	394 aa	Predicted RBP	13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	HCFC1R1	Q9NWW0	138 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	ZSCAN32	Q9NX65	697 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	MTRR	Q9UBK8	725 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	PCDHA12	Q9UN75	941 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	ACACB	O00763	2458 aa		13.61	□□□□□ -0.23
BRF2-204	ENST00000522539	SPTBN2	O15020	2390 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	ZFHX4	Q86UP3	3567 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	MARCH6	O60337	910 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	CDKL5	O76039	1030 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	RECQL4	O94761	1208 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	XBP1	P17861	261 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	CD72	P21854	359 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	TARS	P26639	723 aa	Known RBP	13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	ATXN1	P54253	815 aa	Known RBP	13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	CSTF1	Q05048	431 aa	Known RBP	13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	UBXN2B	Q14CS0	331 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	PABPC1L	Q4VXU2	614 aa	Known RBP	13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	ZBTB41	Q5SVQ8	909 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	CD300LG	Q6UXG3	332 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	CEP57	Q86XR8	500 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	PIGO	Q8TEQ8	1089 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	ATRIP	Q8WXE1	791 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	MTMR9	Q96QG7	549 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	KXD1	Q9BQD3	176 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	PDZD7	Q9H5P4	517 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	GPRC5C	Q9NQ84	441 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	GDE1	Q9NZC3	331 aa		13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	DAXX	Q9UER7	740 aa	Predicted RBP	13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	SMG5	Q9UPR3	1016 aa	Known RBP	13.6	□□□□□ -0.23
BRF2-204	ENST00000522539	PRR5-ARHGAP8	B1AHC4	643 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	N4BP3	O15049	544 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	TBC1D4	O60343	1298 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	CTDNEP1	O95476	244 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	SPATA31C1	P0DKV0	1188 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	TDGF1	P13385	188 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	IGFBP6	P24592	240 aa	Predicted RBP	13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	OR1D2	P34982	312 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	ARHGAP8	P85298	464 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	NR5A1	Q13285	461 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	CNTNAP3B	Q96NU0	1288 aa		13.59	□□□□□ -0.23
BRF2-204	ENST00000522539	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.59	□□□□□ -0.23

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