RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 TMCO2Q7Z6W1 182 aaPredicted RBP17.67■□□□□ 0.42
LSM1-204ENST00000522515 NPAS4Q8IUM7 802 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 CREBRFQ8IUR6 639 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 HERVK_113Q902F9 699 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 CCDC127Q96BQ5 260 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 SNX27Q96L92 541 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 ZFP42Q96MM3 310 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 RSAD1Q9HA92 442 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 TOPORSQ9NS56 1045 aaPredicted RBP17.67■□□□□ 0.42
LSM1-204ENST00000522515 ARMCX3Q9UH62 379 aaPredicted RBP17.67■□□□□ 0.42
LSM1-204ENST00000522515 LRFN2Q9ULH4 789 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 GIT1Q9Y2X7 761 aa17.67■□□□□ 0.42
LSM1-204ENST00000522515 AMHP03971 560 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 ZNF18P17022 549 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 MLH1P40692 756 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 KCNJ6P48051 423 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 MARSP56192 900 aaKnown RBP17.66■□□□□ 0.42
LSM1-204ENST00000522515 DLG4P78352 724 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 SPAG1Q07617 926 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 BFSP1Q12934 665 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 PSMD6Q15008 389 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 CLLU1OSQ5K130 101 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 C9orf50Q5SZB4 431 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 INTS8Q75QN2 995 aaKnown RBP17.66■□□□□ 0.42
LSM1-204ENST00000522515 FRMD5Q7Z6J6 570 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 PARD3BQ8TEW8 1205 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 TOP1MTQ969P6 601 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 GAD1Q99259 594 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 GDF15Q99988 308 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 PLEKHA5Q9HAU0 1116 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 CITO14578 2027 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 ANK1P16157 1881 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 PTPRSQ13332 1948 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 ARL5CA6NH57 179 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 KCNJ18B7U540 433 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 GOLGA6L19H0YKK7 550 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 ATP1A3P13637 1013 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 GATMP50440 423 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 PPP2R3AQ06190 1150 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 KCNJ12Q14500 433 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 XKR4Q5GH76 650 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 TCP11X2Q5H9J9 407 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 FAM114A1Q8IWE2 563 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 GSTCDQ8NEC7 633 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 HELQQ8TDG4 1101 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 ZMAT2Q96NC0 199 aaKnown RBP17.66■□□□□ 0.42
LSM1-204ENST00000522515 POP1Q99575 1024 aaKnown RBP17.66■□□□□ 0.42
LSM1-204ENST00000522515 METTL14Q9HCE5 456 aaKnown RBP17.66■□□□□ 0.42
LSM1-204ENST00000522515 UBN1Q9NPG3 1134 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 MIOSQ9NXC5 875 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 CNTN3Q9P232 1028 aa17.66■□□□□ 0.42
LSM1-204ENST00000522515 RALGAPA2Q2PPJ7 1873 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 PTGESO14684 152 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 OFD1O75665 1012 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 IL18RAPO95256 599 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 DLATP10515 647 aaKnown RBP17.65■□□□□ 0.42
LSM1-204ENST00000522515 KRT13P13646 458 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 VAMP7P51809 220 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 GLRA4Q5JXX5 417 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 C1orf220Q5T0J3 134 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 TRIM59Q8IWR1 403 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 TMC2Q8TDI7 906 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 FAM84AQ96KN4 292 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 ASB7Q9H672 318 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
LSM1-204ENST00000522515 MAGEC2Q9UBF1 373 aaPredicted RBP17.65■□□□□ 0.42
LSM1-204ENST00000522515 INPP5FQ9Y2H2 1132 aa17.65■□□□□ 0.42
LSM1-204ENST00000522515 CEP290O15078 2479 aa17.64■□□□□ 0.42
LSM1-204ENST00000522515 PTPRJQ12913 1337 aa17.64■□□□□ 0.42
LSM1-204ENST00000522515 TRIP11Q15643 1979 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 SMIM28A0A1B0GU29 152 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 LRRIQ3A6PVS8 624 aaPredicted RBP17.64■□□□□ 0.41
LSM1-204ENST00000522515 TRIM49P0CI25 452 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 TRIM49CP0CI26 452 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 EEF1GP26641 437 aaKnown RBP17.64■□□□□ 0.41
LSM1-204ENST00000522515 SCNN1GP51170 649 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 MCCD1P59942 119 aaPredicted RBP17.64■□□□□ 0.41
LSM1-204ENST00000522515 SHHQ15465 462 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 SURF1Q15526 300 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 RASIP1Q5U651 963 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 LMBRD2Q68DH5 695 aaPredicted RBP17.64■□□□□ 0.41
LSM1-204ENST00000522515 JADE1Q6IE81 842 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 FAM117BQ6P1L5 589 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 GLB1LQ6UWU2 654 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 CD302Q8IX05 232 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 EFCAB13Q8IY85 973 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 SLC35C1Q96A29 364 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 FNBP1Q96RU3 617 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 UBE2OQ9C0C9 1292 aaKnown RBP17.64■□□□□ 0.41
LSM1-204ENST00000522515 PLAGL2Q9UPG8 496 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 SLC4A7Q9Y6M7 1214 aa17.64■□□□□ 0.41
LSM1-204ENST00000522515 INPPL1O15357 1258 aa17.63■□□□□ 0.41
LSM1-204ENST00000522515 DGKIO75912 1065 aa17.63■□□□□ 0.41
LSM1-204ENST00000522515 NFICP08651 508 aa17.63■□□□□ 0.41
LSM1-204ENST00000522515 KCNE1P15382 129 aa17.63■□□□□ 0.41
LSM1-204ENST00000522515 CDK11BP21127 795 aaKnown RBP17.63■□□□□ 0.41
LSM1-204ENST00000522515 MTIF2P46199 727 aaKnown RBP17.63■□□□□ 0.41
LSM1-204ENST00000522515 CLDN10P78369 228 aa17.63■□□□□ 0.41
LSM1-204ENST00000522515 MLLT1Q03111 559 aaPredicted RBP17.63■□□□□ 0.41
LSM1-204ENST00000522515 DCAF17Q5H9S7 520 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms