RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NPHP3-ACAD11A0A0J9YXS1 232 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 BRD1O95696 1058 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 HARSP12081 509 aaKnown RBP22.72■■□□□ 1.23
SDCBP-209ENST00000522243 GRM5P41594 1212 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 TMEM119Q4V9L6 283 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 PLCD3Q8N3E9 789 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 ZBTB45Q96K62 511 aaPredicted RBP22.72■■□□□ 1.23
SDCBP-209ENST00000522243 PPP1R10Q96QC0 940 aaKnown RBP22.72■■□□□ 1.23
SDCBP-209ENST00000522243 TCHPQ9BT92 498 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 TTPALQ9BTX7 342 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 TIPINQ9BVW5 301 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 CCDC94Q9BW85 323 aaPredicted RBP22.72■■□□□ 1.23
SDCBP-209ENST00000522243 C17orf75Q9HAS0 396 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 GOLGA2P5Q9HBQ8 144 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 DPP7Q9UHL4 492 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 VWA8A3KMH1 1905 aa22.72■■□□□ 1.23
SDCBP-209ENST00000522243 VPS37CA5D8V6 355 aaPredicted RBP22.71■■□□□ 1.23
SDCBP-209ENST00000522243 CLCNKBP51801 687 aa22.71■■□□□ 1.23
SDCBP-209ENST00000522243 YARSP54577 528 aaKnown RBP22.71■■□□□ 1.23
SDCBP-209ENST00000522243 GRIN1Q05586 938 aa22.71■■□□□ 1.23
SDCBP-209ENST00000522243 MTMR3Q13615 1198 aa22.71■■□□□ 1.23
SDCBP-209ENST00000522243 DHX8Q14562 1220 aaKnown RBP22.71■■□□□ 1.23
SDCBP-209ENST00000522243 ELMSAN1Q6PJG2 1045 aa22.71■■□□□ 1.23
SDCBP-209ENST00000522243 SUGP1Q8IWZ8 645 aaKnown RBP22.71■■□□□ 1.23
SDCBP-209ENST00000522243 GPR65Q8IYL9 337 aa22.71■■□□□ 1.23
SDCBP-209ENST00000522243 FBXL6Q8N531 539 aa22.71■■□□□ 1.23
SDCBP-209ENST00000522243 CMASQ8NFW8 434 aaPredicted RBP22.71■■□□□ 1.23
SDCBP-209ENST00000522243 SMG7Q92540 1137 aaKnown RBP22.71■■□□□ 1.23
SDCBP-209ENST00000522243 ACSF2Q96CM8 615 aaPredicted RBP22.71■■□□□ 1.23
SDCBP-209ENST00000522243 PDGFBP01127 241 aaPredicted RBP22.7■■□□□ 1.22
SDCBP-209ENST00000522243 PLS3P13797 630 aa22.7■■□□□ 1.22
SDCBP-209ENST00000522243 CUL4AQ13619 759 aa22.7■■□□□ 1.22
SDCBP-209ENST00000522243 SF3A1Q15459 793 aaKnown RBP22.7■■□□□ 1.22
SDCBP-209ENST00000522243 PSMD5Q16401 504 aa22.7■■□□□ 1.22
SDCBP-209ENST00000522243 LILRA6Q6PI73 481 aa22.7■■□□□ 1.22
SDCBP-209ENST00000522243 OTOP3Q7RTS5 596 aa22.7■■□□□ 1.22
SDCBP-209ENST00000522243 LNX1Q8TBB1 728 aaPredicted RBP22.7■■□□□ 1.22
SDCBP-209ENST00000522243 LRRC15Q8TF66 581 aa22.7■■□□□ 1.22
SDCBP-209ENST00000522243 CLSTN3Q9BQT9 956 aa22.7■■□□□ 1.22
SDCBP-209ENST00000522243 NTPCRQ9BSD7 190 aaKnown RBP22.7■■□□□ 1.22
SDCBP-209ENST00000522243 PIDD1Q9HB75 910 aa22.7■■□□□ 1.22
SDCBP-209ENST00000522243 SMIM28A0A1B0GU29 152 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 ABLIM1O14639 778 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 B3GAT3O94766 335 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 PROZP22891 400 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 UBA7P41226 1012 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 CREMQ03060 361 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 SOX4Q06945 474 aaPredicted RBP22.69■■□□□ 1.22
SDCBP-209ENST00000522243 ELAVL2Q12926 359 aaKnown RBP22.69■■□□□ 1.22
SDCBP-209ENST00000522243 STRN3Q13033 797 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 IER5LQ5T953 404 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 MPZL3Q6UWV2 235 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 BRAPQ7Z569 592 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 KCTD17Q8N5Z5 321 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 TMEM161BQ8NDZ6 487 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 HDAC7Q8WUI4 952 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 SPIRE2Q8WWL2 714 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 PIK3R5Q8WYR1 880 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 ZNF707Q96C28 371 aaPredicted RBP22.69■■□□□ 1.22
SDCBP-209ENST00000522243 CALML4Q96GE6 196 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 AK8Q96MA6 479 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 PLEKHA4Q9H4M7 779 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 TOPORSQ9NS56 1045 aaPredicted RBP22.69■■□□□ 1.22
SDCBP-209ENST00000522243 CITO14578 2027 aa22.69■■□□□ 1.22
SDCBP-209ENST00000522243 KMT2EQ8IZD2 1858 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 I3L4J1 428 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 ADAM12O43184 909 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 MCF2P10911 925 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 GBP2P32456 591 aaPredicted RBP22.68■■□□□ 1.22
SDCBP-209ENST00000522243 BRCC3P46736 316 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 SMTNP53814 917 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 SEZ6Q53EL9 994 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 ARSHQ5FYA8 562 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 DCLRE1AQ6PJP8 1040 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 CD300LGQ6UXG3 332 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 UBALD2Q8IYN6 164 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 ZMAT2Q96NC0 199 aaKnown RBP22.68■■□□□ 1.22
SDCBP-209ENST00000522243 ACAP3Q96P50 834 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 WDR6Q9NNW5 1121 aaKnown RBP22.68■■□□□ 1.22
SDCBP-209ENST00000522243 ANKFY1Q9P2R3 1169 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 ZNF318Q5VUA4 2279 aa22.68■■□□□ 1.22
SDCBP-209ENST00000522243 CLUHO75153 1309 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 N4BP1O75113 896 aaKnown RBP22.67■■□□□ 1.22
SDCBP-209ENST00000522243 MAPTP10636 758 aaKnown RBP22.67■■□□□ 1.22
SDCBP-209ENST00000522243 VCPP55072 806 aaKnown RBP22.67■■□□□ 1.22
SDCBP-209ENST00000522243 UPP1Q16831 310 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 XKR4Q5GH76 650 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 ALKAL1Q6UXT8 129 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 GPBP1Q86WP2 473 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 C3orf58Q8NDZ4 430 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 RASSF8Q8NHQ8 419 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 SNX27Q96L92 541 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 KCND2Q9NZV8 630 aa22.67■■□□□ 1.22
SDCBP-209ENST00000522243 DAXXQ9UER7 740 aaPredicted RBP22.67■■□□□ 1.22
SDCBP-209ENST00000522243 TMEM189-UBE2V1I3L0A0 370 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 ZMYND10O75800 440 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 BMP15O95972 392 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 C1RP00736 705 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 MCM6Q14566 821 aa22.66■■□□□ 1.22
SDCBP-209ENST00000522243 KARSQ15046 597 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms