RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 NOTCH2Q04721 2471 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 ABCA12Q86UK0 2595 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 NR1I2O75469 434 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 FTH1P19P0C7X4 201 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 PTPN2P17706 415 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 FCHO2Q0JRZ9 810 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 SEC23AQ15436 765 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 TRIM61Q5EBN2 209 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 UBXN11Q5T124 520 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 PIP4K2CQ8TBX8 421 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 TCEAL4Q96EI5 215 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 ZSWIM3Q96MP5 696 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 AGPAT5Q9NUQ2 364 aa8.56□□□□□ -1.04
HMBOX1-208ENST00000521516 ABCA7Q8IZY2 2146 aa8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 MGAQ8IWI9 3026 aa8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 VWA8A3KMH1 1905 aa8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 DHX15O43143 795 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 PSMD5Q16401 504 aa8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 IFIT1BQ5T764 474 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 E2F7Q96AV8 911 aa8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 NUSAP1Q9BXS6 441 aaKnown RBP8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 INO80BQ9C086 356 aaPredicted RBP8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 ZBTB40Q9NUA8 1239 aa8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 MIOSQ9NXC5 875 aa8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 ATG2BQ96BY7 2078 aa8.55□□□□□ -1.04
HMBOX1-208ENST00000521516 A0A087WZ62 844 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 ARHGEF37A1IGU5 675 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 ARL5CA6NH57 179 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 HEPACAM2A8MVW5 462 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 MEIS1O00470 390 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 ZNF197O14709 1029 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 CD59P13987 128 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 CCR2P41597 374 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 CYP4F3Q08477 520 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 TRIP6Q15654 476 aaKnown RBP8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 ZNF410Q86VK4 478 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 RSPRY1Q96DX4 576 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 FAM167AQ96KS9 214 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 FDXACB1Q9BRP7 624 aaPredicted RBP8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 TTPALQ9BTX7 342 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 MBD1Q9UIS9 605 aaPredicted RBP8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 PCDHA6Q9UN73 950 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 PCDHA8Q9Y5H6 950 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 SF3B1O75533 1304 aaKnown RBP eCLIP8.54□□□□□ -1.042e-6■■■■■ 74.6
HMBOX1-208ENST00000521516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 TEX51A0A1B0GUA7 166 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 PYCARD-AS1I3L0S3 204 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 MOSPD3O75425 235 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 GBP1P32455 592 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 KIF5BP33176 963 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 SPIRE1Q08AE8 756 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 DRP2Q13474 957 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 CEP55Q53EZ4 464 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 SLC23A3Q6PIS1 610 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 CATSPER4Q7RTX7 472 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 TMPRSS7Q7RTY8 843 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 HDDC3Q8N4P3 179 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 SMG8Q8ND04 991 aaKnown RBP8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 CNNM3Q8NE01 707 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 PIGKQ92643 395 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 PSTPIP2Q9H939 334 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 POLR3BQ9NW08 1133 aaPredicted RBP8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 PTPRBP23467 1997 aa8.54□□□□□ -1.04
HMBOX1-208ENST00000521516 SPDYE3A6NKU9 549 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 APBB3O95704 486 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 SCNN1GP51170 649 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 MCMDC2Q4G0Z9 681 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 COLEC12Q5KU26 742 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 TOGARAM2Q6ZUX3 1019 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 PNPLA1Q8N8W4 532 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 PANK1Q8TE04 598 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 GAD1Q99259 594 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 UBAC1Q9BSL1 405 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 ZMYM2Q9UBW7 1377 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 FAM205CA6NFA0 338 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 B8ZZF3 427 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 DDX39AO00148 427 aaKnown RBP8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 ZNF213O14771 459 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 ITPKBP27987 946 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 HOXA11P31270 313 aaPredicted RBP8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 CSRP3P50461 194 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 CAMK2BQ13554 666 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 UBE2SQ16763 222 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 TMEM196Q5HYL7 178 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 GLRX5Q86SX6 157 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 DAGLBQ8NCG7 672 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 ZSCAN18Q8TBC5 510 aaPredicted RBP8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 WBP1Q96G27 269 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 FCRL3Q96P31 734 aaPredicted RBP8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 TMEM209Q96SK2 561 aa8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 POLMQ9NP87 494 aaPredicted RBP8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 KIAA1522Q9P206 1035 aaPredicted RBP8.53□□□□□ -1.04
HMBOX1-208ENST00000521516 MYH9P35579 1960 aaKnown RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 THADAQ6YHU6 1953 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 IGKV6-21A0A0C4DH24 114 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms