RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 IGFLR1Q9H665 355 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 PRDM9Q9NQV7 894 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 STK17AQ9UEE5 414 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 CD207Q9UJ71 328 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 MTMR6Q9Y217 621 aa11.2□□□□□ -0.62
TRIM35-204ENST00000521283 NRP1O14786 923 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 B4GALT5O43286 388 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 GDF9O60383 454 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 PPP6R2O75170 966 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 CXCL14O95715 111 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 THP07101 528 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 IRS1P35568 1242 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 LTBRP36941 435 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 MLH1P40692 756 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 KCNQ1P51787 676 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 YARSP54577 528 aaKnown RBP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 DSC1Q08554 894 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 ELAVL2Q12926 359 aaKnown RBP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 PTPAQ15257 358 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 SMAD2Q15796 467 aaKnown RBP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 PDXDC1Q6P996 788 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 CCDC73Q6ZRK6 1079 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 FAM178BQ8IXR5 827 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 COLGALT2Q8IYK4 626 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 VPS52Q8N1B4 723 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 KRI1Q8N9T8 703 aaKnown RBP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 BSNDQ8WZ55 320 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 LARP4BQ92615 738 aaKnown RBP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 UROC1Q96N76 676 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 TSPAN18Q96SJ8 248 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 GBP3Q9H0R5 595 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 ZBP1Q9H171 429 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 NXF3Q9H4D5 531 aaKnown RBP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 PDZD7Q9H5P4 517 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 PARVGQ9HBI0 331 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 MRPL17Q9NRX2 175 aaKnown RBP11.19□□□□□ -0.62
TRIM35-204ENST00000521283 DZANK1Q9NVP4 752 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 PARP2Q9UGN5 583 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 CFAP45Q9UL16 551 aa11.19□□□□□ -0.62
TRIM35-204ENST00000521283 MYH15Q9Y2K3 1946 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 C2orf71A6NGG8 1288 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 MEIS3P2A8K0S8 358 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 TOM1L1O75674 476 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 DDHD2O94830 711 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 BRD1O95696 1058 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 POMCP01189 267 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 SOD2P04179 222 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 KRT18P05783 430 aaKnown RBP11.18□□□□□ -0.62
TRIM35-204ENST00000521283 MAPTP10636 758 aaKnown RBP11.18□□□□□ -0.62
TRIM35-204ENST00000521283 MCF2P10911 925 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 OR1G1P47890 313 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 SLC11A1P49279 550 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 NASPP49321 788 aaPredicted RBP11.18□□□□□ -0.62
TRIM35-204ENST00000521283 ITIH3Q06033 890 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 TUSC3Q13454 348 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 LONRF3Q496Y0 759 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 RRAGBQ5VZM2 374 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 PLPP4Q5VZY2 271 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 KCNK18Q7Z418 384 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 RBM23Q86U06 439 aaKnown RBP11.18□□□□□ -0.62
TRIM35-204ENST00000521283 ZNF280BQ86YH2 543 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 DAW1Q8N136 415 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 SMRP1Q8NCR6 262 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 RAD54LQ92698 747 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 MSLNLQ96KJ4 702 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 ACO2Q99798 780 aaKnown RBP11.18□□□□□ -0.62
TRIM35-204ENST00000521283 PYM1Q9BRP8 204 aaKnown RBP11.18□□□□□ -0.62
TRIM35-204ENST00000521283 TCHPQ9BT92 498 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 RUSC1Q9BVN2 902 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 SLC38A7Q9NVC3 462 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 SEL1LQ9UBV2 794 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 FCF1Q9Y324 198 aaKnown RBP11.18□□□□□ -0.62
TRIM35-204ENST00000521283 CITO14578 2027 aa11.18□□□□□ -0.62
TRIM35-204ENST00000521283 NT5C1B-RDH14C9J2C7 533 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 H3BQ06 376 aaPredicted RBP11.17□□□□□ -0.62
TRIM35-204ENST00000521283 CLDN3O15551 220 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 MBTPS2O43462 519 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 TBCAO75347 108 aaKnown RBP11.17□□□□□ -0.62
TRIM35-204ENST00000521283 FAM13AO94988 1023 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 YEATS4O95619 227 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 URODP06132 367 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 LIG1P18858 919 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 PLCG1P19174 1290 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 GRM5P41594 1212 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 SCNN1GP51170 649 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 ZNF131P52739 623 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 NCKAP1LP55160 1127 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 MAPK7Q13164 816 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 KCNC3Q14003 757 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 STK38Q15208 465 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 USP41Q3LFD5 358 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 KIAA1841Q6NSI8 718 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 CES5AQ6NT32 575 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 MPZL3Q6UWV2 235 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 CYP26C1Q6V0L0 522 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 SV2BQ7L1I2 683 aa11.17□□□□□ -0.62
TRIM35-204ENST00000521283 ADGRD2Q7Z7M1 963 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms