RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ABCD1P33897 745 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 MATR3P43243 847 aaKnown RBP eCLIP22.58■■□□□ 1.21
TRIM35-203ENST00000521253 HSP90AA2PQ14568 343 aaPredicted RBP22.58■■□□□ 1.21
TRIM35-203ENST00000521253 CLUL1Q15846 466 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 SEZ6Q53EL9 994 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 XKR4Q5GH76 650 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 TAS1R1Q7RTX1 841 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 RNF168Q8IYW5 571 aaPredicted RBP22.58■■□□□ 1.21
TRIM35-203ENST00000521253 SNX27Q96L92 541 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 SPATA32Q96LK8 384 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 PPP1R10Q96QC0 940 aaKnown RBP22.58■■□□□ 1.21
TRIM35-203ENST00000521253 MRPL44Q9H9J2 332 aaKnown RBP22.58■■□□□ 1.21
TRIM35-203ENST00000521253 TBC1D7Q9P0N9 293 aa22.58■■□□□ 1.21
TRIM35-203ENST00000521253 BARX2Q9UMQ3 279 aaPredicted RBP22.58■■□□□ 1.21
TRIM35-203ENST00000521253 MUC3AQ02505 3323 aa22.58■■□□□ 1.2
TRIM35-203ENST00000521253 SMIM28A0A1B0GU29 152 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 FSD2A1L4K1 749 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 MEFVO15553 781 aaPredicted RBP22.57■■□□□ 1.2
TRIM35-203ENST00000521253 PPP1R37O75864 691 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 SOD2P04179 222 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 KCNC3Q14003 757 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 PTPN14Q15678 1187 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 HERC4Q5GLZ8 1057 aaPredicted RBP22.57■■□□□ 1.2
TRIM35-203ENST00000521253 PTCRAQ6ISU1 281 aaPredicted RBP22.57■■□□□ 1.2
TRIM35-203ENST00000521253 SLC39A4Q6P5W5 647 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 HERC2P3Q9BVR0 1158 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 STRA6Q9BX79 667 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 LRRC27Q9C0I9 530 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 PANK4Q9NVE7 773 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 ADAM28Q9UKQ2 775 aa22.57■■□□□ 1.2
TRIM35-203ENST00000521253 TDRD15B5MCY1 1934 aaKnown RBP22.57■■□□□ 1.2
TRIM35-203ENST00000521253 CLASP2O75122 1294 aaKnown RBP22.56■■□□□ 1.2
TRIM35-203ENST00000521253 LLGL2Q6P1M3 1020 aa22.56■■□□□ 1.2
TRIM35-203ENST00000521253 MSLNLQ96KJ4 702 aa22.56■■□□□ 1.2
TRIM35-203ENST00000521253 ZMAT2Q96NC0 199 aaKnown RBP22.56■■□□□ 1.2
TRIM35-203ENST00000521253 GPR62Q9BZJ7 368 aa22.56■■□□□ 1.2
TRIM35-203ENST00000521253 TRIM9Q9C026 710 aa22.56■■□□□ 1.2
TRIM35-203ENST00000521253 OLFML3Q9NRN5 406 aa22.56■■□□□ 1.2
TRIM35-203ENST00000521253 KCNH3Q9ULD8 1083 aa22.56■■□□□ 1.2
TRIM35-203ENST00000521253 GRXCR2A6NFK2 248 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 LILRB3O75022 631 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 TADA2AO75478 443 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 KIF4AO95239 1232 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 IL9P15248 144 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 AMPD3Q01432 767 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 SLC10A6Q3KNW5 377 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 PUS10Q3MIT2 529 aaKnown RBP22.55■■□□□ 1.2
TRIM35-203ENST00000521253 FUT10Q6P4F1 479 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 CCDC65Q8IXS2 484 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 HASPINQ8TF76 798 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 HVCN1Q96D96 273 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 NECAB3Q96P71 396 aaPredicted RBP22.55■■□□□ 1.2
TRIM35-203ENST00000521253 UHRF1Q96T88 793 aaPredicted RBP22.55■■□□□ 1.2
TRIM35-203ENST00000521253 IKZF4Q9H2S9 585 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 MAGEF1Q9HAY2 307 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 CNTN3Q9P232 1028 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 CD207Q9UJ71 328 aa22.55■■□□□ 1.2
TRIM35-203ENST00000521253 A0A0B4J269 797 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 TISP43B9A030 160 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 ANKRD63C9JTQ0 380 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 FAM189A1O60320 539 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 GCNT3O95395 438 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 URODP06132 367 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 CLTAP09496 248 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 CXCL8P10145 99 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 KCNE1P15382 129 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 CMA1P23946 247 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 CASP5P51878 434 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 SOX4Q06945 474 aaPredicted RBP22.54■■□□□ 1.2
TRIM35-203ENST00000521253 KCNA1Q09470 495 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 ZBTB41Q5SVQ8 909 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 ADALQ6DHV7 355 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 TMEM184AQ6ZMB5 413 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 TMEM87AQ8NBN3 555 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 B3GALT6Q96L58 329 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 MSTO1Q9BUK6 570 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 FGFBP2Q9BYJ0 223 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 SCAND2PQ9GZW5 306 aaPredicted RBP22.54■■□□□ 1.2
TRIM35-203ENST00000521253 GOLGA2P5Q9HBQ8 144 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 MRPL17Q9NRX2 175 aaKnown RBP22.54■■□□□ 1.2
TRIM35-203ENST00000521253 CHST7Q9NS84 486 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 HCFC2Q9Y5Z7 792 aa22.54■■□□□ 1.2
TRIM35-203ENST00000521253 BDP1A6H8Y1 2624 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 C2CD2LO14523 706 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 MYBP10242 640 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 TNFSF9P41273 254 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 GLUD2P49448 558 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 CLCNKBP51801 687 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 ASIC1P78348 528 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 NUCB2P80303 420 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 COASYQ13057 564 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 L1TD1Q5T7N2 865 aaKnown RBP22.53■■□□□ 1.2
TRIM35-203ENST00000521253 KIAA0319Q5VV43 1072 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 CNNM4Q6P4Q7 775 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 C7orf25Q9BPX7 421 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 PYM1Q9BRP8 204 aaKnown RBP22.53■■□□□ 1.2
TRIM35-203ENST00000521253 SLC38A7Q9NVC3 462 aa22.53■■□□□ 1.2
TRIM35-203ENST00000521253 SF3B1O75533 1304 aaKnown RBP eCLIP22.53■■□□□ 1.2
TRIM35-203ENST00000521253 C5orf42Q9H799 3197 aa22.52■■□□□ 1.2
TRIM35-203ENST00000521253 A0A1B0GVL5 298 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms