RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 CLSTN3Q9BQT9 956 aa12.72□□□□□ -0.37
MRPS28-206ENST00000520946 NFKBIZQ9BYH8 718 aa12.72□□□□□ -0.37
MRPS28-206ENST00000520946 ZSWIM6Q9HCJ5 1215 aa12.72□□□□□ -0.37
MRPS28-206ENST00000520946 LTB4R2Q9NPC1 389 aa12.72□□□□□ -0.37
MRPS28-206ENST00000520946 XPNPEP1Q9NQW7 623 aa12.72□□□□□ -0.37
MRPS28-206ENST00000520946 PDRG1Q9NUG6 133 aa12.72□□□□□ -0.37
MRPS28-206ENST00000520946 DLL3Q9NYJ7 618 aa12.72□□□□□ -0.37
MRPS28-206ENST00000520946 CACNG4Q9UBN1 327 aa12.72□□□□□ -0.37
MRPS28-206ENST00000520946 MTCL1Q9Y4B5 1905 aaKnown RBP12.72□□□□□ -0.37
MRPS28-206ENST00000520946 ZMYM2Q9UBW7 1377 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 KIF4AO95239 1232 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 LRG1P02750 347 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 ATP2B1P20020 1258 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 KRT2P35908 639 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 ARL2P36404 184 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 TXKP42681 527 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 PRPF4BQ13523 1007 aaKnown RBP12.71□□□□□ -0.37
MRPS28-206ENST00000520946 SUMF1Q8NBK3 374 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 GSTCDQ8NEC7 633 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 LNX1Q8TBB1 728 aaPredicted RBP12.71□□□□□ -0.37
MRPS28-206ENST00000520946 PIGOQ8TEQ8 1089 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 MCRS1Q96EZ8 462 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 PRIMPOLQ96LW4 560 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 C2orf40Q9H1Z8 148 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 TTC12Q9H892 705 aaPredicted RBP12.71□□□□□ -0.37
MRPS28-206ENST00000520946 SNTG2Q9NY99 539 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 KCNH3Q9ULD8 1083 aa12.71□□□□□ -0.37
MRPS28-206ENST00000520946 MTF2Q9Y483 593 aaPredicted RBP12.71□□□□□ -0.37
MRPS28-206ENST00000520946 DOCK8Q8NF50 2099 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 PRRG1O14668 218 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 TBC1D4O60343 1298 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 B3GAT3O94766 335 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 PAPLNO95428 1278 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 NRLP54845 237 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 NPY5RQ15761 445 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 MAPK6Q16659 721 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 AMHR2Q16671 573 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
MRPS28-206ENST00000520946 RTL10Q7L3V2 364 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 MCPH1Q8NEM0 835 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 DEPTORQ8TB45 409 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 PAAF1Q9BRP4 392 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 BRD9Q9H8M2 597 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 HCFC1R1Q9NWW0 138 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
MRPS28-206ENST00000520946 SMG5Q9UPR3 1016 aaKnown RBP12.7□□□□□ -0.38
MRPS28-206ENST00000520946 GDAQ9Y2T3 454 aa12.7□□□□□ -0.38
MRPS28-206ENST00000520946 CACNA1IQ9P0X4 2223 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 A0A087WWV3 80 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 MAN2B1O00754 1011 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 RECQL4O94761 1208 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 LYPLA2O95372 231 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 XRCC6P12956 609 aaKnown RBP eCLIP12.69□□□□□ -0.38
MRPS28-206ENST00000520946 PTPN2P17706 415 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 RARRES1P49788 294 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 ARPP19P56211 112 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 ADCY1Q08828 1119 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 RAB33AQ14088 237 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 TRIM29Q14134 588 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 TSSK4Q6SA08 328 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 ANKS3Q6ZW76 656 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 NOSTRINQ8IVI9 506 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 NPAS3Q8IXF0 933 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 MAML2Q8IZL2 1156 aaPredicted RBP12.69□□□□□ -0.38
MRPS28-206ENST00000520946 ELMOD1Q8N336 334 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 CNTNAP3BQ96NU0 1288 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 DDX23Q9BUQ8 820 aaKnown RBP12.69□□□□□ -0.38
MRPS28-206ENST00000520946 FAM126AQ9BYI3 521 aaPredicted RBP12.69□□□□□ -0.38
MRPS28-206ENST00000520946 CNTNAP3Q9BZ76 1288 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 GDE1Q9NZC3 331 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 DNMT3BQ9UBC3 853 aaKnown RBP12.69□□□□□ -0.38
MRPS28-206ENST00000520946 ORC3Q9UBD5 711 aaPredicted RBP12.69□□□□□ -0.38
MRPS28-206ENST00000520946 CDY1Q9Y6F8 540 aa12.69□□□□□ -0.38
MRPS28-206ENST00000520946 MIA3Q5JRA6 1907 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 ZNF197O14709 1029 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 ADAM12O43184 909 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 NEMFO60524 1076 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 ECI2O75521 394 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 PRKCBP05771 671 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 RHOP08100 348 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 ATXN1P54253 815 aaKnown RBP12.68□□□□□ -0.38
MRPS28-206ENST00000520946 YARSP54577 528 aaKnown RBP12.68□□□□□ -0.38
MRPS28-206ENST00000520946 SPIRE1Q08AE8 756 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 PPP2R5AQ15172 486 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 CYP4A22Q5TCH4 519 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 IQCEQ6IPM2 695 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 PRR23BQ6ZRT6 265 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 ERMNQ8TAM6 284 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 CHAMP1Q96JM3 812 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 IFT74Q96LB3 600 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 HSD17B14Q9BPX1 270 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 RTKNQ9BST9 563 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 ZFP14Q9HCL3 533 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 GPRC5CQ9NQ84 441 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 HEBP1Q9NRV9 189 aa12.68□□□□□ -0.38
MRPS28-206ENST00000520946 STK36Q9NRP7 1315 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 DCDC2BA2VCK2 349 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 ARHGEF35A5YM69 484 aa12.67□□□□□ -0.38
MRPS28-206ENST00000520946 POU2F2P09086 479 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms